Difference between revisions of "RME144"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.27-RXN 1.2.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semial...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME144 RME144] == * direction: ** LEFT-TO-RIGHT * common name: ** RME144 * Synonym(s): == Reaction...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.27-RXN 1.2.1.27-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME144 RME144] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** methylmalonate-semialdehyde_dehydrogenase
+
** RME144
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* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-12179]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c]
+
** 0.056 [[PRO]][c] '''+''' 0.024 [[MET]][c] '''+''' 0.009 [[4-HYDROXY-L-PROLINE]][c] '''+''' 0.03 [[TYR]][c] '''+''' 0.092 [[GLY]][c] '''+''' 0.052 [[GLN]][c] '''+''' 0.041 [[PHE]][c] '''+''' 0.052 [[GLT]][c] '''+''' 0.017 [[HIS]][c] '''+''' 0.012 [[CYS]][c] '''+''' 4.306 [[ATP]][c] '''+''' 0.047 [[ASN]][c] '''+''' 0.06 [[LYS]][c] '''+''' 3.306 [[WATER]][c] '''+''' 0.061 [[VAL]][c] '''+''' 0.037 [[ILE]][c] '''+''' 0.001 [[TRP]][c] '''+''' 0.111 [[L-ALPHA-ALANINE]][c] '''+''' 0.09 [[LEU]][c] '''+''' 0.054 [[SER]][c] '''+''' 0.047 [[L-ASPARTATE]][c] '''+''' 0.052 [[ARG]][c] '''+''' 0.056 [[THR]][c] '''=>''' 4.306 [[ADP]][c] '''+''' 1.0 [[General-Protein-Substrates]][c] '''+''' 4.319 [[PROTON]][c] '''+''' 4.306 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 methylmalonate semialdehyde[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 propanoyl-CoA[c]
+
** 0.056 L-proline[c] '''+''' 0.024 L-methionine[c] '''+''' 0.009 trans-4-hydroxy-L-proline[c] '''+''' 0.03 L-tyrosine[c] '''+''' 0.092 glycine[c] '''+''' 0.052 L-glutamine[c] '''+''' 0.041 L-phenylalanine[c] '''+''' 0.052 L-glutamate[c] '''+''' 0.017 L-histidine[c] '''+''' 0.012 L-cysteine[c] '''+''' 4.306 ATP[c] '''+''' 0.047 L-asparagine[c] '''+''' 0.06 L-lysine[c] '''+''' 3.306 H2O[c] '''+''' 0.061 L-valine[c] '''+''' 0.037 L-isoleucine[c] '''+''' 0.001 L-tryptophan[c] '''+''' 0.111 L-alanine[c] '''+''' 0.09 L-leucine[c] '''+''' 0.054 L-serine[c] '''+''' 0.047 L-aspartate[c] '''+''' 0.052 L-arginine[c] '''+''' 0.056 L-threonine[c] '''=>''' 4.306 ADP[c] '''+''' 1.0 a protein[c] '''+''' 4.319 H+[c] '''+''' 4.306 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_11323]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
** Source: [[orthology-esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5642]], 2,4-dinitrotoluene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5642 PWY-5642]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[manual-primary_network]]
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00922 R00922]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q02253 Q02253]
 
−
** [http://www.uniprot.org/uniprot/Q07536 Q07536]
 
−
** [http://www.uniprot.org/uniprot/P28810 P28810]
 
−
** [http://www.uniprot.org/uniprot/O49218 O49218]
 
−
** [http://www.uniprot.org/uniprot/Q7KW39 Q7KW39]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
+
{{#set: common name=RME144}}
−
{{#set: ec number=EC-1.2.1.27}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_11323}}
+
{{#set: reconstruction category=manual}}
−
{{#set: in pathway=PWY-5642}}
+
{{#set: reconstruction source=manual-primary_network}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:18, 21 March 2018

Reaction RME144

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RME144
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 0.056 L-proline[c] + 0.024 L-methionine[c] + 0.009 trans-4-hydroxy-L-proline[c] + 0.03 L-tyrosine[c] + 0.092 glycine[c] + 0.052 L-glutamine[c] + 0.041 L-phenylalanine[c] + 0.052 L-glutamate[c] + 0.017 L-histidine[c] + 0.012 L-cysteine[c] + 4.306 ATP[c] + 0.047 L-asparagine[c] + 0.06 L-lysine[c] + 3.306 H2O[c] + 0.061 L-valine[c] + 0.037 L-isoleucine[c] + 0.001 L-tryptophan[c] + 0.111 L-alanine[c] + 0.09 L-leucine[c] + 0.054 L-serine[c] + 0.047 L-aspartate[c] + 0.052 L-arginine[c] + 0.056 L-threonine[c] => 4.306 ADP[c] + 1.0 a protein[c] + 4.319 H+[c] + 4.306 phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RME144&oldid=40797"