Difference between revisions of "3.1.4.17-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_16360 == * right end position: ** 3144 * transcription direction: ** NEGATIVE * left end position: ** 449 * centisome position: ** 5.919578...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** iesterase_family_memb...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_16360 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] ==
−
* right end position:
+
* direction:
−
** 3144
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** iesterase_family_member
−
* left end position:
+
** amino_acid_transporter
−
** 449
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/3.1.4.17 EC-3.1.4.17]
−
** 5.919578   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[ARGININE--TRNA-LIGASE-RXN]]
+
* With identifiers:
 +
** 1 [[WATER]][c] '''+''' 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Nucleoside-Monophosphates]][c]
 +
* With common name(s):
 +
** 1 H2O[c] '''+''' 1 a nucleoside cyclic 3',5'-monophosphate[c] '''=>''' 1 H+[c] '''+''' 1 a nucleoside 5'-monophosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_9644]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: ec-number
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_1763]]
−
* [[TRNA-CHARGING-PWY]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_12792]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=3144}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14653 14653]
−
{{#set: left end position=449}}
+
* LIGAND-RXN:
−
{{#set: centisome position=5.919578    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259]
−
{{#set: reaction associated=ARGININE--TRNA-LIGASE-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
** [http://www.uniprot.org/uniprot/P12019 P12019]
 +
** [http://www.uniprot.org/uniprot/Q56686 Q56686]
 +
** [http://www.uniprot.org/uniprot/P14099 P14099]
 +
** [http://www.uniprot.org/uniprot/Q01066 Q01066]
 +
** [http://www.uniprot.org/uniprot/Q01061 Q01061]
 +
** [http://www.uniprot.org/uniprot/P14100 P14100]
 +
** [http://www.uniprot.org/uniprot/Q01065 Q01065]
 +
** [http://www.uniprot.org/uniprot/P27815 P27815]
 +
** [http://www.uniprot.org/uniprot/O66909 O66909]
 +
** [http://www.uniprot.org/uniprot/P14270 P14270]
 +
** [http://www.uniprot.org/uniprot/O27755 O27755]
 +
** [http://www.uniprot.org/uniprot/P44685 P44685]
 +
** [http://www.uniprot.org/uniprot/P22434 P22434]
 +
** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4]
 +
** [http://www.uniprot.org/uniprot/O26280 O26280]
 +
** [http://www.uniprot.org/uniprot/O06629 O06629]
 +
** [http://www.uniprot.org/uniprot/O30241 O30241]
 +
** [http://www.uniprot.org/uniprot/P14644 P14644]
 +
** [http://www.uniprot.org/uniprot/P54748 P54748]
 +
** [http://www.uniprot.org/uniprot/Q13945 Q13945]
 +
** [http://www.uniprot.org/uniprot/Q01062 Q01062]
 +
** [http://www.uniprot.org/uniprot/P54827 P54827]
 +
** [http://www.uniprot.org/uniprot/Q01064 Q01064]
 +
** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56]
 +
** [http://www.uniprot.org/uniprot/O60658 O60658]
 +
** [http://www.uniprot.org/uniprot/P36599 P36599]
 +
** [http://www.uniprot.org/uniprot/P30645 P30645]
 +
** [http://www.uniprot.org/uniprot/Q45859 Q45859]
 +
** [http://www.uniprot.org/uniprot/P12252 P12252]
 +
** [http://www.uniprot.org/uniprot/P06776 P06776]
 +
** [http://www.uniprot.org/uniprot/Q08493 Q08493]
 +
** [http://www.uniprot.org/uniprot/Q63421 Q63421]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=iesterase_family_member}}
 +
{{#set: common name=amino_acid_transporter}}
 +
{{#set: ec number=EC-3.1.4.17}}
 +
{{#set: gene associated=Tiso_gene_9644|Tiso_gene_1763|Tiso_gene_12792}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction 3.1.4.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • iesterase_family_member
    • amino_acid_transporter
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.1.4.17-RXN&oldid=40941"