Difference between revisions of "RXN-17779"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17779 RXN-17779] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA dehydrogenase ** a...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17779 RXN-17779] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** gondoate biosynthesis (anaerobic)
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** Acyl-CoA dehydrogenase
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** acyl-_dehydrogenase
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** acyl-CoA_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
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** cis-11-icosenoate biosynthesis
 
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** (11Z)-icos-11-enoate biosynthesis
 
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** (11Z)-icosenoate biosynthesis
 
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** gondoic acid biosynthesis
 
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** 11-eicosenoic acid biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16629]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-19144]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-19170]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_5939]]
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** 1 H+[c] '''+''' 1 (7Z)-hexadecenoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,7Z)-hexadecenoyl-CoA[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-16630]]
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* Gene: [[Tiso_gene_5449]]
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** 2 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_9885]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_13083]]
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* Gene: [[Tiso_gene_16113]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_8271]]
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* [[RXN-16631]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_6884]]
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* Gene: [[Tiso_gene_6475]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_8272]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16632 RXN-16632]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_16631]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=gondoate biosynthesis (anaerobic)}}
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{{#set: common name=Acyl-CoA dehydrogenase}}
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{{#set: common name=cis-11-icosenoate biosynthesis|(11Z)-icos-11-enoate biosynthesis|(11Z)-icosenoate biosynthesis|gondoic acid biosynthesis|11-eicosenoic acid biosynthesis}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: reaction found=3}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: total reaction=4}}
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{{#set: ec number=EC-1.3.8}}
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{{#set: completion rate=75.0}}
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{{#set: gene associated=Tiso_gene_5449|Tiso_gene_16113|Tiso_gene_8271|Tiso_gene_6475|Tiso_gene_8272|Tiso_gene_16631}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction RXN-17779

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acyl-CoA dehydrogenase
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 (7Z)-hexadecenoyl-CoA[c] + 1 an oxidized electron-transfer flavoprotein[c] => 1 a reduced electron-transfer flavoprotein[c] + 1 (2E,7Z)-hexadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17779&oldid=40961"