Difference between revisions of "ASPCARBTRANS-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_7596 == * Synonym(s): == Reactions associated == * Reaction: GLUTAMINE--TRNA-LIGASE-RXN ** Source: orthology-esiliculosus * Reacti...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** protein_pyr1-3 *...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] == |
+ | * direction: | ||
+ | ** REVERSIBLE | ||
+ | * common name: | ||
+ | ** protein_pyr1-3 | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.1.3.2 EC-2.1.3.2] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * | + | * With identifiers: |
+ | ** 1 [[L-ASPARTATE]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] | ||
+ | * With common name(s): | ||
+ | ** 1 L-aspartate[c] '''+''' 1 carbamoyl phosphate[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_13527]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
− | |||
** Source: [[orthology-creinhardtii]] | ** Source: [[orthology-creinhardtii]] | ||
− | == Pathways | + | ** Source: [[orthology-creinhardtii]] |
− | * [[ | + | == Pathways == |
− | * [[ | + | * [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] |
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20013 20013] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01397 R01397] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P08955 P08955] | ||
+ | ** [http://www.uniprot.org/uniprot/P27708 P27708] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04595 Q04595] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59711 Q59711] | ||
+ | ** [http://www.uniprot.org/uniprot/Q91437 Q91437] | ||
+ | ** [http://www.uniprot.org/uniprot/P65616 P65616] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59712 Q59712] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CF79 Q9CF79] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58976 Q58976] | ||
+ | ** [http://www.uniprot.org/uniprot/P08421 P08421] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A786 P0A786] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A7F3 P0A7F3] | ||
+ | ** [http://www.uniprot.org/uniprot/P19936 P19936] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58801 Q58801] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNJ6 Q9PNJ6] | ||
+ | ** [http://www.uniprot.org/uniprot/P05654 P05654] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A1Z4 P0A1Z4] | ||
+ | ** [http://www.uniprot.org/uniprot/P19910 P19910] | ||
+ | ** [http://www.uniprot.org/uniprot/P07259 P07259] | ||
+ | ** [http://www.uniprot.org/uniprot/P20054 P20054] | ||
+ | ** [http://www.uniprot.org/uniprot/P05990 P05990] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06950 Q06950] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09027 Q09027] | ||
+ | ** [http://www.uniprot.org/uniprot/P49077 P49077] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9S983 Q9S983] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09794 Q09794] | ||
+ | ** [http://www.uniprot.org/uniprot/P74163 P74163] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43064 Q43064] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43086 Q43086] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43087 Q43087] | ||
+ | ** [http://www.uniprot.org/uniprot/Q84493 Q84493] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UAH8 Q9UAH8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60252 Q60252] | ||
+ | ** [http://www.uniprot.org/uniprot/P96174 P96174] | ||
+ | ** [http://www.uniprot.org/uniprot/P96175 P96175] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=protein_pyr1-3}} | ||
+ | {{#set: ec number=EC-2.1.3.2}} | ||
+ | {{#set: gene associated=Tiso_gene_13527}} | ||
+ | {{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 19:22, 21 March 2018
Contents
Reaction ASPCARBTRANS-RXN
- direction:
- REVERSIBLE
- common name:
- protein_pyr1-3
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ASPARTATE[c] + 1 CARBAMOYL-P[c] <=> 1 CARBAMYUL-L-ASPARTATE[c] + 1 PROTON[c] + 1 Pi[c]
- With common name(s):
- 1 L-aspartate[c] + 1 carbamoyl phosphate[c] <=> 1 N-carbamoyl-L-aspartate[c] + 1 H+[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_13527
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
- PWY-7790, UMP biosynthesis II: PWY-7790
- 6 reactions found over 6 reactions in the full pathway
- PWY-7791, UMP biosynthesis III: PWY-7791
- 5 reactions found over 6 reactions in the full pathway
- PWY-5686, UMP biosynthesis I: PWY-5686
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: