Difference between revisions of "Tiso gene 13506"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** fad-containing_monooxy...")
(Created page with "Category:Gene == Gene Tiso_gene_13506 == * right end position: ** 2245 * transcription direction: ** POSITIVE * left end position: ** 786 * centisome position: ** 12.576...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81] ==
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== Gene Tiso_gene_13506 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2245
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** fad-containing_monooxygenase
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* left end position:
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* ec number:
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** 786
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** [http://enzyme.expasy.org/EC/1.14.13.8 EC-1.14.13.8]
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* centisome position:
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** 12.576   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GUANPRIBOSYLTRAN-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NICOTINE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-2743]][c] '''+''' 1 [[NADP]][c]
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 oxygen[c] '''+''' 1 (S)-nicotine[c] '''=>''' 1 H2O[c] '''+''' 1 nicotine-1'-N-oxide[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9613]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[HYPOXANPRIBOSYLTRAN-RXN]]
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* Gene: [[Tiso_gene_10094]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[XANPRIBOSYLTRAN-RXN]]
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* Gene: [[Tiso_gene_4]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9139]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY66-201]], nicotine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-201 PWY66-201]
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** '''3''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6609]]
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* [[PWY-6620]]
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* [[PWY-6599]]
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* [[PWY-6610]]
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* [[SALVPURINE2-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2245}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=fad-containing_monooxygenase}}
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{{#set: left end position=786}}
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{{#set: ec number=EC-1.14.13.8}}
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{{#set: centisome position=12.576    }}
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{{#set: gene associated=Tiso_gene_9613|Tiso_gene_10094|Tiso_gene_4|Tiso_gene_9139}}
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{{#set: reaction associated=GUANPRIBOSYLTRAN-RXN|HYPOXANPRIBOSYLTRAN-RXN|XANPRIBOSYLTRAN-RXN}}
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{{#set: in pathway=PWY66-201}}
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{{#set: pathway associated=PWY-6609|PWY-6620|PWY-6599|PWY-6610|SALVPURINE2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:23, 21 March 2018

Gene Tiso_gene_13506

  • right end position:
    • 2245
  • transcription direction:
    • POSITIVE
  • left end position:
    • 786
  • centisome position:
    • 12.576
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13506&oldid=41249"