Difference between revisions of "PWY-3162"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
 
* common name:
 
* common name:
−
** 1-butanol autotrophic biosynthesis (engineered)
+
** L-tryptophan degradation V (side chain pathway)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''8''' reactions found over '''11''' reactions in the full pathway
+
  '''2''' reactions found over '''13''' reactions in the full pathway
−
* [[2PGADEHYDRAT-RXN]]
+
* [[RXN-5424]]
−
** 4 associated gene(s):
+
** 5 associated gene(s):
−
*** [[Tiso_gene_8720]]
+
*** [[Tiso_gene_6562]]
−
*** [[Tiso_gene_14718]]
+
*** [[Tiso_gene_6563]]
−
*** [[Tiso_gene_5619]]
+
*** [[Tiso_gene_7649]]
−
*** [[Tiso_gene_13317]]
+
*** [[Tiso_gene_5424]]
−
** 7 reconstruction source(s) associated:
+
*** [[Tiso_gene_5425]]
−
*** [[annotation-experimental_annotation]]
+
** 1 reconstruction source(s) associated:
−
*** [[orthology-esiliculosus]]
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
+
* [[RXN-5581]]
−
*** [[orthology-synechocystis]]
+
** 1 associated gene(s):
−
*** [[manual-primary_network]]
+
*** [[Tiso_gene_7322]]
−
*** [[orthology-creinhardtii]]
+
** 2 reconstruction source(s) associated:
−
* [[3PGAREARR-RXN]]
+
−
** 16 associated gene(s):
+
−
*** [[Tiso_gene_15048]]
+
−
*** [[Tiso_gene_7201]]
+
−
*** [[Tiso_gene_9922]]
+
−
*** [[Tiso_gene_2841]]
+
−
*** [[Tiso_gene_14530]]
+
−
*** [[Tiso_gene_16754]]
+
−
*** [[Tiso_gene_2365]]
+
−
*** [[Tiso_gene_16271]]
+
−
*** [[Tiso_gene_5468]]
+
−
*** [[Tiso_gene_20311]]
+
−
*** [[Tiso_gene_14664]]
+
−
*** [[Tiso_gene_15391]]
+
−
*** [[Tiso_gene_14212]]
+
−
*** [[Tiso_gene_10516]]
+
−
*** [[Tiso_gene_9923]]
+
−
*** [[Tiso_gene_2667]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[CALVIN-PWY]]
+
−
** 0 associated gene:
+
−
* [[PEPDEPHOS-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_18206]]
+
−
*** [[Tiso_gene_14504]]
+
−
*** [[Tiso_gene_974]]
+
−
*** [[Tiso_gene_14505]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[PHOSGLYPHOS-RXN]]
+
−
** 6 associated gene(s):
+
−
*** [[Tiso_gene_3526]]
+
−
*** [[Tiso_gene_18264]]
+
−
*** [[Tiso_gene_3527]]
+
−
*** [[Tiso_gene_18263]]
+
−
*** [[Tiso_gene_12104]]
+
−
*** [[Tiso_gene_14642]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
−
* [[PWY-101]]
 
−
** 0 associated gene:
 
−
* [[PWY-6883]]
 
−
** 0 associated gene:
 
−
* [[PYRUVDEH-RXN]]
 
−
** 7 associated gene(s):
 
−
*** [[Tiso_gene_2515]]
 
−
*** [[Tiso_gene_6983]]
 
−
*** [[Tiso_gene_17539]]
 
−
*** [[Tiso_gene_2693]]
 
−
*** [[Tiso_gene_9330]]
 
−
*** [[Tiso_gene_7519]]
 
−
*** [[Tiso_gene_19780]]
 
−
** 3 reconstruction source(s) associated:
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5402 RXN-5402]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5403 RXN-5403]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5421 RXN-5421]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5422 RXN-5422]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5423 RXN-5423]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5441 RXN-5441]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5442 RXN-5442]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5443 RXN-5443]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5444 RXN-5444]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5445 RXN-5445]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5603 RXN-5603]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-186801}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: taxonomic range=TAX-33682}}
+
{{#set: common name=L-tryptophan degradation V (side chain pathway)}}
−
{{#set: taxonomic range=TAX-1117}}
+
{{#set: reaction found=2}}
−
{{#set: common name=1-butanol autotrophic biosynthesis (engineered)}}
+
{{#set: total reaction=13}}
−
{{#set: reaction found=8}}
+
{{#set: completion rate=15.0}}
−
{{#set: total reaction=11}}
+
−
{{#set: completion rate=73.0}}
+

Latest revision as of 19:26, 21 March 2018

Pathway PWY-3162

  • taxonomic range:
  • common name:
    • L-tryptophan degradation V (side chain pathway)
  • Synonym(s):

Reaction(s) found

2 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-3162&oldid=41555"