Difference between revisions of "RXN-6382"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_phos...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6382 RXN-6382] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6382 RXN-6382] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** probable_phosphoribosyl-amp_cyclohydrolase
 
−
** phosphoribosyl-amp_cyclohydrolase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
+
** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-6082]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
+
** 1 NAD(P)+[c] '''+''' 1 3-aminopropanal[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 β-alanine[c] '''+''' 1 NAD(P)H[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_5047]]
+
* Gene: [[Tiso_gene_3513]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_11297]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
−
** Source: [[orthology-synechocystis]]
 
−
** Source: [[orthology-esiliculosus]]
 
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_7322]]
 +
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[PWY-3981]], β-alanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3981 PWY-3981]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5760]], β-alanine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5760 PWY-5760]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 37: Line 31:
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
 
−
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
 
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 
−
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
 
−
** [http://www.uniprot.org/uniprot/O28329 O28329]
 
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
 
−
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
 
−
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
 
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 
−
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
 
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
 
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 
−
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
 
−
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
 
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
 
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
 
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
 
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
 
−
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
 
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
 
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
 
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=probable_phosphoribosyl-amp_cyclohydrolase}}
+
{{#set: ec number=EC-1.2.1}}
−
{{#set: common name=phosphoribosyl-amp_cyclohydrolase}}
+
{{#set: gene associated=Tiso_gene_3513|Tiso_gene_7322}}
−
{{#set: ec number=EC-3.5.4.19}}
+
{{#set: in pathway=PWY-3981|PWY-5760}}
−
{{#set: gene associated=Tiso_gene_5047|Tiso_gene_11297}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=HISTSYN-PWY}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:26, 21 March 2018

Reaction RXN-6382

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3981, β-alanine biosynthesis I: PWY-3981
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5760, β-alanine biosynthesis IV: PWY-5760
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-6382&oldid=41579"