Difference between revisions of "Tiso gene 14262"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9550 RXN-9550] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
(Created page with "Category:Gene == Gene Tiso_gene_14262 == * right end position: ** 2617 * transcription direction: ** POSITIVE * left end position: ** 47 * centisome position: ** 0.8172492...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9550 RXN-9550] ==
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== Gene Tiso_gene_14262 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2617
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
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** POSITIVE
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* left end position:
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** 47
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* centisome position:
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** 0.8172492   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.1.1.211-RXN]]
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** 1 [[Palmitoleoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-9245]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a palmitoleoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c] '''+''' 1 palmitoleate[c]
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* Reaction: [[ENOYL-COA-HYDRAT-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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* Reaction: [[METHYLACYLYLCOA-HYDROXY-RXN]]
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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* [[PWY-5366]], palmitoleate biosynthesis II (plants and bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5366 PWY-5366]
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* Reaction: [[OHACYL-COA-DEHYDROG-RXN]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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*** Assignment: ec-number
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** Source: [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[annotation]]:
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* Reaction: [[RXN-10697]]
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** [[pathwaytools]]:
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** Source: [[orthology-esiliculosus]]
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*** [[in-silico_annotation]]
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* Reaction: [[RXN-10698]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10702]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-10703]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-10704]]
 +
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-10705]]
 +
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-11244]]
 +
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-11245]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-11662]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-12490]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-12570]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-12705]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-12750]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13616]]
 +
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14266]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14271]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-14276]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14393]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-16133]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16559]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17777]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17781]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17786]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17790]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17793]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17794]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17797]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17798]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-7838]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-905]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-2044]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-6513]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[TIGLYLCOA-HYDROXY-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-6920]]
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* [[P162-PWY]]
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* [[PWY-5177]]
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* [[PWY-6583]]
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* [[VALDEG-PWY]]
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* [[PWY-6883]]
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* [[PWY-5138]]
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* [[PWY-5136]]
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* [[PWY-7778]]
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* [[PWY-7779]]
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-5789]]
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* [[FAO-PWY]]
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* [[CENTFERM-PWY]]
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* [[PWY-6945]]
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* [[PWY0-321]]
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* [[PWY-5109]]
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* [[ILEUDEG-PWY]]
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* [[PWY-7007]]
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* [[PWY-6435]]
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* [[PWY-7656]]
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* [[PWY-7046]]
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* [[PWY-7216]]
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* [[PWY-1361]]
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* [[PWY-6946]]
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* [[PWY-81]]
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* [[PWY-6944]]
 +
* [[PWY-735]]
 +
* [[PWY-7401]]
 +
* [[PWY-6863]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2617}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08162 R08162]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=47}}
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{{#set: ec number=EC-3.1.2.14}}
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{{#set: centisome position=0.8172492    }}
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{{#set: in pathway=PWY-5366|PWY-6282}}
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{{#set: reaction associated=1.1.1.211-RXN|ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|RXN-10697|RXN-10698|RXN-10702|RXN-10703|RXN-10704|RXN-10705|RXN-11244|RXN-11245|RXN-11662|RXN-12490|RXN-12570|RXN-12705|RXN-12750|RXN-13616|RXN-14266|RXN-14271|RXN-14276|RXN-14393|RXN-16133|RXN-16559|RXN-17777|RXN-17781|RXN-17786|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-7838|RXN-905|RXN0-2044|RXN0-6513|TIGLYLCOA-HYDROXY-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-6920|P162-PWY|PWY-5177|PWY-6583|VALDEG-PWY|PWY-6883|PWY-5138|PWY-5136|PWY-7778|PWY-7779|PWY-7094|PWY-7654|PWY66-391|PWY-5789|FAO-PWY|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-5109|ILEUDEG-PWY|PWY-7007|PWY-6435|PWY-7656|PWY-7046|PWY-7216|PWY-1361|PWY-6946|PWY-81|PWY-6944|PWY-735|PWY-7401|PWY-6863}}
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{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:34, 21 March 2018

Gene Tiso_gene_14262

  • right end position:
    • 2617
  • transcription direction:
    • POSITIVE
  • left end position:
    • 47
  • centisome position:
    • 0.8172492
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14262&oldid=42467"