Difference between revisions of "RXN-5961"

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(Created page with "Category:Gene == Gene Tiso_gene_2775 == * right end position: ** 17424 * transcription direction: ** POSITIVE * left end position: ** 16196 * centisome position: ** 87.640...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5961 RXN-5961] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_2775 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5961 RXN-5961] ==
* right end position:
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* direction:
** 17424
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/1.14.99 EC-1.14.99]
* left end position:
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** 16196
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* centisome position:
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** 87.64070   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[GSHTRAN-RXN]]
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* With identifiers:
** Source: [[annotation-in-silico_annotation]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-118]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-5661]][c] '''+''' 1 [[WATER]][c]
*** Assignment: automated-name-match
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* With common name(s):
** Source: [[orthology-athaliana]]
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** 1 oxygen[c] '''+''' 1 α-carotene[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 zeinoxanthin[c] '''+''' 1 H2O[c]
* Reaction: [[GST-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
* Reaction: [[RXN-13673]]
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* Gene: [[Tiso_gene_8]]
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
*** Assignment: automated-name-match
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* Gene: [[Tiso_gene_9613]]
* Reaction: [[RXN-15680]]
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** Source: [[orthology-creinhardtii]]
** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_4]]
*** Assignment: automated-name-match
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** Source: [[orthology-creinhardtii]]
== Pathways associated ==
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== Pathways ==
* [[PWY-7112]]
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* [[PWY-5947]], lutein biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5947 PWY-5947]
* [[PWY-6842]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-4061]]
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== Reconstruction information  ==
* [[PWY-7533]]
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* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: right end position=17424}}
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* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07530 R07530]
{{#set: left end position=16196}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=87.64070    }}
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{{#set: ec number=EC-1.14.99}}
{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: gene associated=Tiso_gene_8|Tiso_gene_9613|Tiso_gene_4}}
{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: in pathway=PWY-5947}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:26, 21 March 2018

Reaction RXN-5961

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5947, lutein biosynthesis: PWY-5947
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links