Difference between revisions of "ASPARAGINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-threonine degradation I
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** mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
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** ORF
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** mitochondrial_substrate_carrier_family_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.22 EC-6.1.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[RXN-15121]]
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** 1 [[ATP]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** 0 associated gene:
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* With common name(s):
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** 2 reconstruction source(s) associated:
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** 1 ATP[c] '''+''' 1 L-asparagine[c] '''+''' 1 tRNAasn[c] '''=>''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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* [[RXN-15122]]
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Genes have been associated with this reaction based on different elements listed below.
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** 3 associated gene(s):
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* Gene: [[Tiso_gene_9304]]
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*** [[Tiso_gene_8525]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_17207]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_12535]]
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* Gene: [[Tiso_gene_9908]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_13908]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-15123]]
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*** Assignment: EC-NUMBER
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** 0 associated gene:
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* Gene: [[Tiso_gene_6065]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=KETOBUTFORMLY-RXN KETOBUTFORMLY-RXN]
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* Gene: [[Tiso_gene_9303]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPKIN-RXN PROPKIN-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PTAALT-RXN PTAALT-RXN]
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*** Assignment: EC-NUMBER
 +
== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5437 PWY-5437]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11180 11180]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=L-threonine degradation I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
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{{#set: reaction found=3}}
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* UNIPROT:
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P39772 P39772]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/O57980 O57980]
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** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
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** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
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** [http://www.uniprot.org/uniprot/P47359 P47359]
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** [http://www.uniprot.org/uniprot/O51128 O51128]
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** [http://www.uniprot.org/uniprot/O83618 O83618]
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** [http://www.uniprot.org/uniprot/O58008 O58008]
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** [http://www.uniprot.org/uniprot/O96198 O96198]
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** [http://www.uniprot.org/uniprot/P54262 P54262]
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** [http://www.uniprot.org/uniprot/P75521 P75521]
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** [http://www.uniprot.org/uniprot/Q48966 Q48966]
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** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)}}
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{{#set: common name=ORF}}
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{{#set: common name=mitochondrial_substrate_carrier_family_protein}}
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{{#set: ec number=EC-6.1.1.22}}
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{{#set: gene associated=Tiso_gene_9304|Tiso_gene_9908|Tiso_gene_13908|Tiso_gene_6065|Tiso_gene_9303}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction ASPARAGINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
    • ORF
    • mitochondrial_substrate_carrier_family_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-asparagine[c] + 1 tRNAasn[c] => 1 an L-asparaginyl-[tRNAasn][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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