Difference between revisions of "RXN-5061"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methylcrotonyl-CoA:acetyl...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofolate_red...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
+
** methylenetetrahydrofolate_reductase (ferredoxin)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
+
** [http://enzyme.expasy.org/EC/1.5.7.1 EC-1.5.7.1]
 
* Synonym(s):
 
* Synonym(s):
−
** 5-methyl-3-oxo-4-hexenoyl-CoA thiolase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 5-methyl-3-oxo-4-hexenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-methylcrotonyl-CoA[c]
+
** 2 H+[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_16181]]
+
* Gene: [[Tiso_gene_4806]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
+
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01217 R01217]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase}}
+
{{#set: common name=methylenetetrahydrofolate_reductase (ferredoxin)}}
−
{{#set: ec number=EC-2.3.1}}
+
{{#set: ec number=EC-1.5.7.1}}
−
{{#set: common name=5-methyl-3-oxo-4-hexenoyl-CoA thiolase}}
+
{{#set: gene associated=Tiso_gene_4806}}
−
{{#set: gene associated=Tiso_gene_16181}}
+
{{#set: in pathway=PWY-2201|CODH-PWY}}
−
{{#set: in pathway=PWY-6672}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-experimental_annotation}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:30, 21 March 2018

Reaction RXN-5061

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methylenetetrahydrofolate_reductase (ferredoxin)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 7 reactions found over 12 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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