Difference between revisions of "Tiso gene 3052"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number...")
(Created page with "Category:Gene == Gene Tiso_gene_3052 == * right end position: ** 12016 * transcription direction: ** POSITIVE * left end position: ** 9007 * centisome position: ** 51.0427...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
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== Gene Tiso_gene_3052 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 12016
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
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** POSITIVE
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* left end position:
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** 9007
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* centisome position:
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** 51.04273   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.66-RXN]]
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** 1 [[TYR]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TYRAMINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-tyrosine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 tyramine[c]
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* Reaction: [[RXN-10959]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10960]]
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* Gene: [[Tiso_gene_3686]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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* [[PWY-6368]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7826]], Amaryllidacea alkaloids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7826 PWY-7826]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=12016}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=9007}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
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{{#set: centisome position=51.04273    }}
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* UNIPROT:
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{{#set: reaction associated=3.1.3.66-RXN|RXN-10959|RXN-10960}}
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** [http://www.uniprot.org/uniprot/Q06086 Q06086]
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{{#set: pathway associated=PWY-6368}}
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** [http://www.uniprot.org/uniprot/P54768 P54768]
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** [http://www.uniprot.org/uniprot/P54769 P54769]
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** [http://www.uniprot.org/uniprot/P54770 P54770]
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** [http://www.uniprot.org/uniprot/O82417 O82417]
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** [http://www.uniprot.org/uniprot/P54771 P54771]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.1.25}}
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{{#set: gene associated=Tiso_gene_3686}}
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{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7826|PWY-7297|PWY-5474|PWY-6802}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:30, 21 March 2018

Gene Tiso_gene_3052

  • right end position:
    • 12016
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9007
  • centisome position:
    • 51.04273
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3052&oldid=42031"