Difference between revisions of "Tiso gene 1541"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052...")
(Created page with "Category:Gene == Gene Tiso_gene_1541 == * right end position: ** 15078 * transcription direction: ** POSITIVE * left end position: ** 10644 * centisome position: ** 45.458...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] ==
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== Gene Tiso_gene_1541 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052]
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** 15078
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** POSITIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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** 10644
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* common name:
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* centisome position:
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** reductive TCA cycle I
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** 45.45804   
 
* Synonym(s):
 
* Synonym(s):
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** reductive tricarboxylic acid cycle
 
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** reductive tricarboxylic acid pathway
 
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** reductive citric acid cycle
 
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** reverse citric acid cycle
 
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** carbon fixation
 
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** CO2 fixation
 
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** reductive carboxylic acid cycle
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''12''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[ACONITATEDEHYDR-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_13007]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[RXN-12195]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ACONITATEHYDR-RXN]]
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*** Assignment: ec-number
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** 1 associated gene(s):
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* Reaction: [[RXN-12196]]
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*** [[Tiso_gene_13007]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[RXN0-5462]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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*** Assignment: ec-number
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** 2 associated gene(s):
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== Pathways associated ==
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*** [[Tiso_gene_3691]]
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* [[PWY-7184]]
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*** [[Tiso_gene_6720]]
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* [[PWY-7198]]
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** 6 reconstruction source(s) associated:
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* [[PWY-6545]]
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*** [[annotation-experimental_annotation]]
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* [[PWY-7210]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18262]]
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*** [[Tiso_gene_10809]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PEPSYNTH-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_15846]]
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*** [[Tiso_gene_11866]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3052}}
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{{#set: right end position=15078}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: left end position=10644}}
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{{#set: taxonomic range=TAX-68336}}
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{{#set: centisome position=45.45804    }}
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{{#set: taxonomic range=TAX-200783}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: common name=reductive TCA cycle I}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: reaction found=7}}
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{{#set: total reaction=12}}
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{{#set: completion rate=58.0}}
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Latest revision as of 19:31, 21 March 2018

Gene Tiso_gene_1541

  • right end position:
    • 15078
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10644
  • centisome position:
    • 45.45804
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1541&oldid=42089"