Difference between revisions of "PWY-7046"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10781 RXN-10781] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxytryptophol dehydro...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10781 RXN-10781] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** 5-hydroxytryptophol dehydrogenase
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** 4-coumarate degradation (anaerobic)
** polyketide_synthase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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* Synonym(s):
 
* Synonym(s):
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** p-coumarate degradation (anaerobic)
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''6''' reactions in the full pathway
** 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[CPD-11671]][c] '''+''' 1 [[NAD]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
* With common name(s):
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** 2 associated gene(s):
** 1 5-hydroxyindole acetaldehyde[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 5-hydroxytryptophol[c] '''+''' 1 NAD+[c]
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*** [[Tiso_gene_12275]]
 
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*** [[Tiso_gene_14183]]
== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
* Gene: [[Tiso_gene_6562]]
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*** [[orthology-esiliculosus]]
** Source: [[annotation-in-silico_annotation]]
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* [[RXN-11244]]
*** Assignment: EC-NUMBER
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** 3 associated gene(s):
* Gene: [[Tiso_gene_7649]]
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*** [[Tiso_gene_6885]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_16145]]
*** Assignment: EC-NUMBER
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*** [[Tiso_gene_14262]]
* Gene: [[Tiso_gene_5424]]
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** 1 reconstruction source(s) associated:
** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
* Gene: [[Tiso_gene_6563]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBENZOATE--COA-LIGASE-RXN 4-HYDROXYBENZOATE--COA-LIGASE-RXN]
** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=OHBENZCOARED-RXN OHBENZCOARED-RXN]
*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13392 RXN-13392]
* Gene: [[Tiso_gene_5425]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13394 RXN-13394]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
{{#set: common name=5-hydroxytryptophol dehydrogenase}}
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{{#set: common name=4-coumarate degradation (anaerobic)}}
{{#set: common name=polyketide_synthase}}
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{{#set: common name=p-coumarate degradation (anaerobic)}}
{{#set: common name=ORF}}
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{{#set: reaction found=2}}
{{#set: ec number=EC-1.1.1.1}}
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{{#set: total reaction=6}}
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_5425}}
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{{#set: completion rate=33.0}}
{{#set: in pathway=PWY-6313}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:31, 21 March 2018

Pathway PWY-7046

  • taxonomic range:
  • common name:
    • 4-coumarate degradation (anaerobic)
  • Synonym(s):
    • p-coumarate degradation (anaerobic)

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links