Difference between revisions of "2.7.1.134-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.134-RXN 2.7.1.134-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ras-related_gtp-bin...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.134-RXN 2.7.1.134-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** L-cysteine biosynthesis III (from L-homocysteine)
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** ras-related_gtp-binding_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.134 EC-2.7.1.134]
 
* Synonym(s):
 
* Synonym(s):
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** L-homocysteine degradation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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** 1 [[CPD-178]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-1107]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_7852]]
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** 1 D-myo-inositol (3,4,5,6)-tetrakisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 D-myo-inositol 1,3,4,5,6-pentakisphosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_3732]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_15232]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14048]]
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*** Assignment: EC-NUMBER
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** 1 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_3732]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-6365]], D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6365 PWY-6365]
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*** [[orthology-esiliculosus]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-15121]]
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* [[PWY-4661]], 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4661 PWY-4661]
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** 0 associated gene:
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** '''3''' reactions found over '''7''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN-15123]]
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*** Tool: [[pantograph]]
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** 0 associated gene:
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* LIGAND-MAP:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?map00660 map00660]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12452 12452]
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{{#set: taxonomic range=TAX-33154}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03479 R03479]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-cysteine biosynthesis III (from L-homocysteine)}}
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{{#set: common name=ras-related_gtp-binding_protein}}
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{{#set: common name=L-homocysteine degradation}}
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{{#set: ec number=EC-2.7.1.134}}
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{{#set: reaction found=4}}
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{{#set: gene associated=Tiso_gene_15232}}
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{{#set: total reaction=4}}
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{{#set: in pathway=PWY-6365|PWY-4661}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:31, 21 March 2018

Reaction 2.7.1.134-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ras-related_gtp-binding_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-myo-inositol (3,4,5,6)-tetrakisphosphate[c] + 1 ATP[c] => 1 D-myo-inositol 1,3,4,5,6-pentakisphosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6365, D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis: PWY-6365
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4661, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza): PWY-4661
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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