Difference between revisions of "ORNITHINE-CYCLODEAMINASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11059 RXN-11059] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** ornithine_cyclodeaminase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_1843]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_17134]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY] |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| + | * [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q59701 Q59701] | ||
| + | ** [http://www.uniprot.org/uniprot/P09773 P09773] | ||
| + | ** [http://www.uniprot.org/uniprot/P33728 P33728] | ||
| + | ** [http://www.uniprot.org/uniprot/O68052 O68052] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC- | + | {{#set: common name=ornithine_cyclodeaminase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-4.3.1.12}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=Tiso_gene_1843|Tiso_gene_17134}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}} |
| − | {{#set: reconstruction source=orthology-esiliculosus}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:32, 21 March 2018
Contents
Reaction ORNITHINE-CYCLODEAMINASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ornithine_cyclodeaminase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ORNITHINE[c] => 1 PRO[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 L-ornithine[c] => 1 L-proline[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1843
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17134
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- ORN-AMINOPENTANOATE-CAT-PWY, L-ornithine degradation I (L-proline biosynthesis): ORN-AMINOPENTANOATE-CAT-PWY
- 1 reactions found over 1 reactions in the full pathway
- ARG-GLU-PWY, L-arginine degradation VII (arginase 3 pathway): ARG-GLU-PWY
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
