Difference between revisions of "2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** 3-ketoacyl-_thi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] == * direction: ** LEF...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thiolase
+
** 4-methyl-2-oxopentanoate dehydrogenase (acylating)
−
** 3-ketoacyl-_thiolase
+
−
** acetyl-_c-acetyltransferase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11528]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-11529]][c]
+
** 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ISOVALERYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 OPC4-3-ketoacyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 jasmonoyl-CoA[c]
+
** 1 4-methyl-2-oxopentanoate[c] '''+''' 1 NAD+[c] '''+''' 1 coenzyme A[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 isovaleryl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_3855]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Tiso_gene_10116]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Tiso_gene_17451]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Tiso_gene_3856]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Tiso_gene_15327]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
−
** '''15''' reactions found over '''19''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 50: Line 26:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25177 25177]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01651 R01651]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thiolase}}
+
{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (acylating)}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: ec number=EC-1.2.1}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: in pathway=LEU-DEG2-PWY}}
−
{{#set: ec number=EC-2.3.1.16}}
+
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_15327}}
+
−
{{#set: in pathway=PWY-735}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:33, 21 March 2018

Reaction 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-methyl-2-oxopentanoate dehydrogenase (acylating)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links




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