Difference between revisions of "CENTFERM-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_15465 == * right end position: ** 4945 * transcription direction: ** POSITIVE * left end position: ** 827 * centisome position: ** 16.53338...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
 
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_15465 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] ==
* right end position:
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* taxonomic range:
** 4945
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
** POSITIVE
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* common name:
* left end position:
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** pyruvate fermentation to butanoate
** 827
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* centisome position:
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** 16.533386   
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* Synonym(s):
 
* Synonym(s):
 +
** central fermentation pathway
 +
** acetobutylicum fermentation
 +
** pyruvate fermentation to butyrate
  
== Reactions associated ==
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== Reaction(s) found ==
* Reaction: [[ATPASE-RXN]]
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'''3''' reactions found over '''7''' reactions in the full pathway
** Source: [[annotation-in-silico_annotation]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
*** Assignment: ec-number
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** 3 associated gene(s):
* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** [[Tiso_gene_16181]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_15327]]
*** Assignment: ec-number
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*** [[Tiso_gene_17451]]
* Reaction: [[RXN-11109]]
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** 4 reconstruction source(s) associated:
** Source: [[orthology-esiliculosus]]
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*** [[orthology-athaliana]]
* Reaction: [[RXN-12195]]
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*** [[orthology-creinhardtii]]
** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
* Reaction: [[RXN-12196]]
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* [[RXN-11662]]
** Source: [[annotation-in-silico_annotation]]
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** 7 associated gene(s):
*** Assignment: ec-number
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*** [[Tiso_gene_16703]]
* Reaction: [[RXN0-5462]]
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*** [[Tiso_gene_14027]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_14262]]
*** Assignment: ec-number
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*** [[Tiso_gene_14026]]
== Pathways associated ==
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*** [[Tiso_gene_18838]]
* [[PWY-7184]]
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*** [[Tiso_gene_18839]]
* [[PWY-7198]]
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*** [[Tiso_gene_5857]]
* [[PWY-6545]]
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** 5 reconstruction source(s) associated:
* [[PWY-7210]]
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11667]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_5857]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE-KINASE-RXN BUTYRATE-KINASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATE-BUTYRYLTRANSFERASE-RXN PHOSPHATE-BUTYRYLTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
 
== External links  ==
 
== External links  ==
{{#set: right end position=4945}}
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{{#set: taxonomic range=TAX-1224}}
{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-1239}}
{{#set: left end position=827}}
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{{#set: common name=pyruvate fermentation to butanoate}}
{{#set: centisome position=16.533386    }}
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{{#set: common name=central fermentation pathway|acetobutylicum fermentation|pyruvate fermentation to butyrate}}
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-11109|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: reaction found=3}}
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: total reaction=7}}
 +
{{#set: completion rate=43.0}}

Latest revision as of 19:33, 21 March 2018

Pathway CENTFERM-PWY

  • taxonomic range:
  • common name:
    • pyruvate fermentation to butanoate
  • Synonym(s):
    • central fermentation pathway
    • acetobutylicum fermentation
    • pyruvate fermentation to butyrate

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links