Difference between revisions of "PWY-6672"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7800 RXN-7800] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7800 RXN-7800] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** cis-genanyl-CoA degradation
 
* Synonym(s):
 
* Synonym(s):
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** acyclic terpene utilization pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''9''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-7100]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[ACETATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 H+[c] '''+''' 1 (2S)-2-isopropyl-3-oxosuccinate[c] '''=>''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_3617]]
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*** [[Tiso_gene_1612]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_3616]]
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== Pathways  ==
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** 6 reconstruction source(s) associated:
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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*** [[annotation-experimental_annotation]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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*** [[annotation-in-silico_annotation]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-synechocystis]]
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== Reconstruction information  ==
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*** [[manual-primary_network]]
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* Category: [[annotation]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-11917]]
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*** Tool: [[pathwaytools]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16181]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11919]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14257]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-11921]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16181]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.26-RXN 4.1.3.26-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GERANOYL-COA-CARBOXYLASE-RXN GERANOYL-COA-CARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11918 RXN-11918]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11920 RXN-11920]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-MAP:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25078 25078]
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** [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281]
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* LIGAND-RXN:
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* UM-BBD-PWY : cit
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** [http://www.genome.jp/dbget-bin/www_bget?R01652 R01652]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cis-genanyl-CoA degradation}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: common name=acyclic terpene utilization pathway}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=4}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: total reaction=9}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=44.0}}

Latest revision as of 19:35, 21 March 2018

Pathway PWY-6672

  • taxonomic range:
  • common name:
    • cis-genanyl-CoA degradation
  • Synonym(s):
    • acyclic terpene utilization pathway

Reaction(s) found

4 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6672&oldid=42614"