Difference between revisions of "PWY-5120"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2962 RXN-2962] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5120 PWY-5120] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2962 RXN-2962] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5120 PWY-5120] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/1.1.1.284 EC-1.1.1.284]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
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** geranylgeranyl diphosphate biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** GGPP biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''1''' reactions in the full pathway
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** 1 [[S-HYDROXYMETHYLGLUTATHIONE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-548]][c] '''+''' 1 [[PROTON]][c]
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 S-(hydroxymethyl)glutathione[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 NAD(P)H[c] '''+''' 1 S-formylglutathione[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_7305]]
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*** [[Tiso_gene_16284]]
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== Genes associated with this reaction  ==
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** 6 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_18459]]
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** [[orthology-athaliana]]
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* [[PWY-1801]], formaldehyde oxidation II (glutathione-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1801 PWY-1801]
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*** [[orthology-synechocystis]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[manual-primary_network]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R06983 R06983]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5120 PWY-5120]
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** [http://www.genome.jp/dbget-bin/www_bget?R07140 R07140]
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-1.1.1.284}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: gene associated=Tiso_gene_18459}}
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{{#set: common name=geranylgeranyl diphosphate biosynthesis}}
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{{#set: in pathway=PWY-1801}}
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{{#set: common name=GGPP biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=1}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=1}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: completion rate=100.0}}

Latest revision as of 20:35, 21 March 2018

Pathway PWY-5120

  • taxonomic range:
  • common name:
    • geranylgeranyl diphosphate biosynthesis
  • Synonym(s):
    • GGPP biosynthesis

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5120&oldid=42574"