Difference between revisions of "RXN-16425"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10911 RXN-10911] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16425 RXN-16425] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_metalloprotea...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10911 RXN-10911] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16425 RXN-16425] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** atp-dependent_metalloprotease
−
** ORF
+
** phosphoacetylglucosamine_mutase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
−
** 3,4-dihydroxyphenylglycol dehydrogenase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADH]][c] '''+''' 1 [[DIHYDROXYPHENYLGLYCOLALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-11878]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[N-ACETYL-D-GLUCOSAMINE-6-P]][c] '''+''' 1 [[Phosphoacetylglucosamine-Mutase-P]][c] '''=>''' 1 [[N-ACETYL-D-GLUCOSAMINE-16-BIS-P]][c] '''+''' 1 [[Phosphoacetylglucosamine-Mutase]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADH[c] '''+''' 1 3,4-dihydroxyphenylglycolaldehyde[c] '''+''' 1 H+[c] '''=>''' 1 3,4-dihydroxyphenylglycol[c] '''+''' 1 NAD+[c]
+
** 1 N-acetyl-D-glucosamine 6-phosphate[c] '''+''' 1 a phosphorylated phosphoacetylglucosamine mutase[c] '''=>''' 1 N-acetyl-D-glucosamine 1,6-bisphosphate[c] '''+''' 1 a phosphoacetylglucosamine mutase[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_6562]]
+
* Gene: [[Tiso_gene_13231]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_7649]]
+
* Gene: [[Tiso_gene_13230]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_6563]]
+
** Source: [[annotation-experimental_annotation]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_18459]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_5425]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_5424]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6342]], noradrenaline and adrenaline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342]
 
−
** '''2''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31147 31147]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04880 R04880]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=atp-dependent_metalloprotease}}
−
{{#set: common name=ORF}}
+
{{#set: common name=phosphoacetylglucosamine_mutase}}
−
{{#set: ec number=EC-1.1.1.1}}
+
{{#set: gene associated=Tiso_gene_13231|Tiso_gene_13230}}
−
{{#set: common name=3,4-dihydroxyphenylglycol dehydrogenase}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_18459|Tiso_gene_5425|Tiso_gene_5424}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=PWY-6342}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:37, 21 March 2018

Reaction RXN-16425

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • atp-dependent_metalloprotease
    • phosphoacetylglucosamine_mutase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16425&oldid=42784"