Difference between revisions of "PWY-7560"

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(Created page with "Category:Gene == Gene Tiso_gene_12351 == * left end position: ** 6612 * transcription direction: ** POSITIVE * right end position: ** 7116 * centisome position: ** 92.9043...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-57...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_12351 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] ==
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* left end position:
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* taxonomic range:
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** 6612
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** POSITIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* right end position:
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* common name:
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** 7116
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** methylerythritol phosphate pathway II
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* centisome position:
+
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** 92.90431   
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* Synonym(s):
 
* Synonym(s):
 +
** nonmevalonate isopentenyl diphosphate biosynthesis
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** methylerythritol phosphate degradation
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** MEP degradation
 +
** deoxyxylulose phosphate pathway
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** DOXP pathway
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** Rohmer pathway
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** isopentenyl diphosphate biosynthesis -- mevalonate-independent
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** nonmevalonate isoprenoid pathway
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** MEP pathway
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
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'''9''' reactions found over '''9''' reactions in the full pathway
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** in-silico_annotation
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* [[2.7.1.148-RXN]]
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***ec-number
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** 1 associated gene(s):
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== Pathways associated ==
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*** [[Tiso_gene_13463]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[2.7.7.60-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_17568]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[DXPREDISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_15169]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[DXS-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_17311]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[IPPISOM-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_8653]]
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** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[ISPH2-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5609]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN0-302]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_9642]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN0-882]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_15758]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN0-884]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_5609]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6612}}
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{{#set: taxonomic range=TAX-5794}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: right end position=7116}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: centisome position=92.90431    }}
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{{#set: common name=methylerythritol phosphate pathway II}}
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{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
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{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
 +
{{#set: reaction found=9}}
 +
{{#set: total reaction=9}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 19:07, 21 March 2018

Pathway PWY-7560

  • taxonomic range:
  • common name:
    • methylerythritol phosphate pathway II
  • Synonym(s):
    • nonmevalonate isopentenyl diphosphate biosynthesis
    • methylerythritol phosphate degradation
    • MEP degradation
    • deoxyxylulose phosphate pathway
    • DOXP pathway
    • Rohmer pathway
    • isopentenyl diphosphate biosynthesis -- mevalonate-independent
    • nonmevalonate isoprenoid pathway
    • MEP pathway

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7560&oldid=39594"