Difference between revisions of "OANTIGEN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200940 TAX-200940]
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** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-544448 TAX-544448]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-508458 TAX-508458]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203682 TAX-203682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40117 TAX-40117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-142182 TAX-142182]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783270 TAX-1783270]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-74152 TAX-74152]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68297 TAX-68297]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1297 TAX-1297]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200930 TAX-200930]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200938 TAX-200938]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783257 TAX-1783257]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-67814 TAX-67814]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
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** O-antigen building blocks biosynthesis (E. coli)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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  '''3''' reactions found over '''5''' reactions in the full pathway
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** 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
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* [[DTDPRHAMSYN-PWY]]
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* With common name(s):
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** 0 associated gene:
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** 1 3,8-divinyl chlorophyllide a[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 chlorophyllide a[c] '''+''' 1 NADP+[c]
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* [[GALPMUT-RXN]]
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** 2 associated gene(s):
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_15395]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_3775]]
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* Gene: [[Tiso_gene_13868]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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== Pathways ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526]
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* [[UDPNAGSYN-PWY]]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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** 0 associated gene:
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* [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758]
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== Reaction(s) not found ==
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** '''1''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759]
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** '''1''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7760]], bacteriochlorophyll e biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7760 PWY-7760]
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** '''1''' reactions found over '''26''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14449 14449]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-200918}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
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{{#set: taxonomic range=TAX-200940}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-544448}}
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{{#set: ec number=EC-1.3.1.75}}
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{{#set: taxonomic range=TAX-508458}}
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{{#set: gene associated=Tiso_gene_13868}}
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{{#set: taxonomic range=TAX-203691}}
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{{#set: in pathway=PWY-5526|PWY-7758|PWY-7759|PWY-5064|PWY-5086|PWY-7760}}
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{{#set: taxonomic range=TAX-203682}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: taxonomic range=TAX-40117}}
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{{#set: reconstruction source=manual-primary_network|orthology-creinhardtii}}
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{{#set: taxonomic range=TAX-142182}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: taxonomic range=TAX-32066}}
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{{#set: taxonomic range=TAX-1783270}}
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{{#set: taxonomic range=TAX-74152}}
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{{#set: taxonomic range=TAX-68297}}
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{{#set: taxonomic range=TAX-1297}}
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{{#set: taxonomic range=TAX-200930}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: taxonomic range=TAX-200938}}
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{{#set: taxonomic range=TAX-200795}}
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{{#set: taxonomic range=TAX-1783257}}
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{{#set: taxonomic range=TAX-67814}}
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{{#set: taxonomic range=TAX-68336}}
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{{#set: taxonomic range=TAX-200783}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=O-antigen building blocks biosynthesis (E. coli)}}
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{{#set: reaction found=3}}
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{{#set: total reaction=5}}
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{{#set: completion rate=60.0}}

Latest revision as of 19:38, 21 March 2018

Pathway OANTIGEN-PWY

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links














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