Difference between revisions of "PHOSPHONOTASE-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHONOTASE-PWY PHOSPHONOTASE-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHONOTASE-PWY PHOSPHONOTASE-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** glutamate-1-semialdehyde_-aminomutase_chloroplastic
+
** 2-aminoethylphosphonate degradation I
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** phosphonotase pathway
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
+
* [[ACETALD-DEHYDROG-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
+
*** [[Tiso_gene_7649]]
−
 
+
*** [[Tiso_gene_2052]]
−
== Genes associated with this reaction  ==
+
** 2 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-in-silico_annotation]]
−
* Gene: [[Tiso_gene_8141]]
+
*** [[orthology-creinhardtii]]
−
** Source: [[annotation-in-silico_annotation]]
+
== Reaction(s) not found ==
−
*** Assignment: EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.37-RXN 2.6.1.37-RXN]
−
** Source: [[annotation-experimental_annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHONOACETALDEHYDE-HYDROLASE-RXN PHOSPHONOACETALDEHYDE-HYDROLASE-RXN]
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
== Pathways  ==
+
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
+
{{#set: common name=2-aminoethylphosphonate degradation I}}
−
* LIGAND-RXN:
+
{{#set: common name=phosphonotase pathway}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
+
{{#set: reaction found=1}}
−
* UNIPROT:
+
{{#set: total reaction=3}}
−
** [http://www.uniprot.org/uniprot/P18492 P18492]
+
{{#set: completion rate=33.0}}
−
** [http://www.uniprot.org/uniprot/P21267 P21267]
+
−
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
+
−
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
+
−
** [http://www.uniprot.org/uniprot/P23893 P23893]
+
−
** [http://www.uniprot.org/uniprot/O26330 O26330]
+
−
** [http://www.uniprot.org/uniprot/P30949 P30949]
+
−
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
+
−
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
+
−
** [http://www.uniprot.org/uniprot/O29027 O29027]
+
−
** [http://www.uniprot.org/uniprot/P45621 P45621]
+
−
** [http://www.uniprot.org/uniprot/P24630 P24630]
+
−
** [http://www.uniprot.org/uniprot/P31593 P31593]
+
−
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
+
−
** [http://www.uniprot.org/uniprot/P48247 P48247]
+
−
** [http://www.uniprot.org/uniprot/P46716 P46716]
+
−
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
+
−
** [http://www.uniprot.org/uniprot/O74061 O74061]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glutamate-1-semialdehyde_-aminomutase_chloroplastic}}
+
−
{{#set: ec number=EC-5.4.3.8}}
+
−
{{#set: gene associated=Tiso_gene_8141}}
+
−
{{#set: in pathway=PWY-5188}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:42, 21 March 2018

Pathway PHOSPHONOTASE-PWY

  • taxonomic range:
  • common name:
    • 2-aminoethylphosphonate degradation I
  • Synonym(s):
    • phosphonotase pathway

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PHOSPHONOTASE-PWY&oldid=43366"