Difference between revisions of "RXN66-576"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-576 RXN66-576] == * direction: ** LEFT-TO-RIGHT * common name: ** dimethylglycine_dehydrogena...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-576 RXN66-576] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chloroplast_beta-keto_acyl_reductase
+
** dimethylglycine_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
** [http://enzyme.expasy.org/EC/1.5.8 EC-1.5.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-14422]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-14419]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 2 [[ETF-Oxidized]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[ETF-Reduced]][c] '''+''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[SARCOSINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''=>''' 1 3R-hydroxy-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)+[c]
+
** 1 dimethylglycine[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 2 an oxidized electron-transfer flavoprotein[c] '''+''' 3 H+[c] '''=>''' 2 a reduced electron-transfer flavoprotein[c] '''+''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 1 sarcosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_9885]]
+
* Gene: [[Tiso_gene_2717]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_13083]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
** Source: [[orthology-esiliculosus]]
 
−
* Gene: [[Tiso_gene_9871]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
+
* [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: common name=dimethylglycine_dehydrogenase}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: ec number=EC-1.5.8}}
−
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083|Tiso_gene_9871}}
+
{{#set: gene associated=Tiso_gene_2717}}
−
{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
+
{{#set: in pathway=PWY-3661-1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:43, 21 March 2018

Reaction RXN66-576

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dimethylglycine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3661-1, glycine betaine degradation II (mammalian): PWY-3661-1
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-576&oldid=43400"