Difference between revisions of "RXN-11734"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-12 PWY4FS-12] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] == * direction: ** REVERSIBLE * common name: ** acyl-coenzyme_a_oxidase ** ORF...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-12 PWY4FS-12] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** REVERSIBLE
 
* common name:
 
* common name:
** VTC2 cycle
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** acyl-coenzyme_a_oxidase
 +
** ORF
 +
** acyl-_dehydrogenase
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** acyl-CoA_dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
 
* Synonym(s):
 
* Synonym(s):
** GDP-D-mannose biosynthesis
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
* [[RXN-1882]]
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** 1 [[Medium-Chain-234-Saturated-acyl-CoAs]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[medium-Chain-Trans-23-Dehydroacyl-CoA]][c] '''+''' 1 [[ETF-Reduced]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_6621]]
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** 1 a medium-chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''<=>''' 1 a medium-chain trans-2,3-dehydroacyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Genes associated with this reaction  ==
*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
== Reaction(s) not found ==
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* Gene: [[Tiso_gene_6475]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-12 RXN4FS-12]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_883]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16631]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17967]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18566]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5991]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=REVERSIBLE}}
{{#set: common name=VTC2 cycle}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
{{#set: common name=GDP-D-mannose biosynthesis}}
+
{{#set: common name=ORF}}
{{#set: reaction found=1}}
+
{{#set: common name=acyl-_dehydrogenase}}
{{#set: total reaction=2}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
{{#set: completion rate=50.0}}
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{{#set: ec number=EC-1.3.8.7}}
 +
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_883|Tiso_gene_16631|Tiso_gene_17967|Tiso_gene_18566|Tiso_gene_5991}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction RXN-11734

  • direction:
    • REVERSIBLE
  • common name:
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links