Difference between revisions of "RXN-8346"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NQOR-RXN NQOR-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** possible_vitamin_k_epoxide_pl...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8346 RXN-8346] == * direction: ** LEFT-TO-RIGHT * common name: ** di-homo-γ-linolenate &D...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NQOR-RXN NQOR-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8346 RXN-8346] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** possible_vitamin_k_epoxide_plastid_protein
+
** di-homo-γ-linolenate Δ5 desaturase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.6.5.2 EC-1.6.5.2]
+
** [http://enzyme.expasy.org/EC/1.14.19.30 EC-1.14.19.30]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETR-Quinones]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-17283]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-17284]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an electron-transfer quinone[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 NAD(P)+[c]
+
** 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 a [glycerolipid]-di-homo-γ-linolenate[c] '''+''' 2 a ferrocytochrome b5[c] '''=>''' 2 H2O[c] '''+''' 2 a ferricytochrome b5[c] '''+''' 1 a [glycerolipid]-arachidonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_10318]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P15559 P15559]
 
−
** [http://www.uniprot.org/uniprot/P16083 P16083]
 
−
** [http://www.uniprot.org/uniprot/P05982 P05982]
 
−
** [http://www.uniprot.org/uniprot/Q64669 Q64669]
 
−
** [http://www.uniprot.org/uniprot/P0A756 P0A756]
 
−
** [http://www.uniprot.org/uniprot/P43340 P43340]
 
−
** [http://www.uniprot.org/uniprot/P0A754 P0A754]
 
−
** [http://www.uniprot.org/uniprot/P45245 P45245]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=possible_vitamin_k_epoxide_plastid_protein}}
+
{{#set: common name=di-homo-γ-linolenate Δ5 desaturase}}
−
{{#set: ec number=EC-1.6.5.2}}
+
{{#set: ec number=EC-1.14.19.30}}
−
{{#set: gene associated=Tiso_gene_10318}}
+
{{#set: in pathway=PWY-5353|PWY-7601}}
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction RXN-8346

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • di-homo-γ-linolenate Δ5 desaturase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8346&oldid=44221"