Difference between revisions of "PHOSPHOGLUCMUT-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14208 RXN-14208] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] == * direction: ** REVERSIBLE * common name: ** cytoplasmic...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
− | ** | + | ** cytoplasmic |
+ | ** pgm_pmm | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.4.2.2 EC-5.4.2.2] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** | + | ** 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 1 α-D-glucopyranose 1-phosphate[c] '''<=>''' 1 D-glucopyranose 6-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[Tiso_gene_4816]] |
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_13477]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
− | |||
== Pathways == | == Pathways == | ||
+ | * [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7343]], UDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622] | ||
+ | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-6731]], starch degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6737]], starch degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6737 PWY-6737] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5940]], streptomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940] | ||
+ | ** '''2''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYNTH-PWY GLYCOGENSYNTH-PWY] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * Category: [[ | + | * Category: [[manual]] |
− | ** Source: [[ | + | ** Source: [[manual-primary_network]] |
− | + | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
− | |||
− | |||
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23536 23536] |
− | {{#set: ec number=EC- | + | * PIR: |
− | {{#set: gene associated= | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801] |
− | {{#set: in pathway=}} | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614] |
− | {{#set: reconstruction category= | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614] |
− | {{#set: reconstruction source=annotation- | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650] |
− | {{#set: reconstruction tool= | + | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803] |
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P36871 P36871] | ||
+ | ** [http://www.uniprot.org/uniprot/P40390 P40390] | ||
+ | ** [http://www.uniprot.org/uniprot/P40391 P40391] | ||
+ | ** [http://www.uniprot.org/uniprot/P95090 P95090] | ||
+ | ** [http://www.uniprot.org/uniprot/P36938 P36938] | ||
+ | ** [http://www.uniprot.org/uniprot/P57002 P57002] | ||
+ | ** [http://www.uniprot.org/uniprot/P38569 P38569] | ||
+ | ** [http://www.uniprot.org/uniprot/P31120 P31120] | ||
+ | ** [http://www.uniprot.org/uniprot/P00949 P00949] | ||
+ | ** [http://www.uniprot.org/uniprot/P38652 P38652] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q16106 Q16106] | ||
+ | ** [http://www.uniprot.org/uniprot/P33401 P33401] | ||
+ | ** [http://www.uniprot.org/uniprot/P37012 P37012] | ||
+ | ** [http://www.uniprot.org/uniprot/P74643 P74643] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51847 Q51847] | ||
+ | ** [http://www.uniprot.org/uniprot/P93804 P93804] | ||
+ | ** [http://www.uniprot.org/uniprot/P93805 P93805] | ||
+ | ** [http://www.uniprot.org/uniprot/P93262 P93262] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=cytoplasmic}} | ||
+ | {{#set: common name=pgm_pmm}} | ||
+ | {{#set: ec number=EC-5.4.2.2}} | ||
+ | {{#set: gene associated=Tiso_gene_4816|Tiso_gene_13477}} | ||
+ | {{#set: in pathway=PWY-7238|PWY-5384|GLYCOCAT-PWY|PWY-7343|PWY-3801|PWY-622|PWY-6731|GLUCOSE1PMETAB-PWY|PWY-6737|PWY-6317|PWY-2723|PWY66-422|PWY-5940|GLYCOGENSYNTH-PWY|PWY-5941|PWY-5661}} | ||
+ | {{#set: reconstruction category=manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 19:52, 21 March 2018
Contents
Reaction PHOSPHOGLUCMUT-RXN
- direction:
- REVERSIBLE
- common name:
- cytoplasmic
- pgm_pmm
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GLC-1-P[c] <=> 1 D-glucopyranose-6-phosphate[c]
- With common name(s):
- 1 α-D-glucopyranose 1-phosphate[c] <=> 1 D-glucopyranose 6-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_4816
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13477
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-7238, sucrose biosynthesis II: PWY-7238
- 6 reactions found over 8 reactions in the full pathway
- PWY-5384, sucrose degradation IV (sucrose phosphorylase): PWY-5384
- 3 reactions found over 4 reactions in the full pathway
- GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
- 6 reactions found over 8 reactions in the full pathway
- PWY-7343, UDP-glucose biosynthesis: PWY-7343
- 2 reactions found over 2 reactions in the full pathway
- PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY-622, starch biosynthesis: PWY-622
- 2 reactions found over 10 reactions in the full pathway
- PWY-6731, starch degradation III: PWY-6731
- 2 reactions found over 4 reactions in the full pathway
- GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation: GLUCOSE1PMETAB-PWY
- 3 reactions found over 5 reactions in the full pathway
- PWY-6737, starch degradation V: PWY-6737
- 2 reactions found over 4 reactions in the full pathway
- PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
- 5 reactions found over 5 reactions in the full pathway
- PWY-2723, trehalose degradation V: PWY-2723
- 2 reactions found over 3 reactions in the full pathway
- PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
- 5 reactions found over 5 reactions in the full pathway
- PWY-5940, streptomycin biosynthesis: PWY-5940
- 2 reactions found over 18 reactions in the full pathway
- GLYCOGENSYNTH-PWY, glycogen biosynthesis I (from ADP-D-Glucose): GLYCOGENSYNTH-PWY
- 1 reactions found over 4 reactions in the full pathway
- PWY-5941, glycogen degradation II: PWY-5941
- 3 reactions found over 6 reactions in the full pathway
- PWY-5661, GDP-glucose biosynthesis: PWY-5661
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
- PIR:
- LIGAND-RXN:
- UNIPROT: