Difference between revisions of "RXN0-1342"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** panto...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1342 RXN0-1342] == * direction: ** LEFT-TO-RIGHT * common name: ** s-adenosylmethionine_trna_r...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1342 RXN0-1342] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** pantothenate_kinase_isoform_1
+
** s-adenosylmethionine_trna_ribosyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.33 EC-2.7.1.33]
+
** [http://enzyme.expasy.org/EC/2.4.99.17 EC-2.4.99.17]
 
* Synonym(s):
 
* Synonym(s):
−
** type III pantothenate kinase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''=>''' 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[tRNAs-containing-epoxy-quenosine]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 (R)-pantothenate[c] '''=>''' 1 (R)-4'-phosphopantothenate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** 1 a 7-aminomethyl-7-deazaguanosine34 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 L-methionine[c] '''+''' 1 an epoxyqueuosine34 in tRNA[c] '''+''' 1 H+[c] '''+''' 1 adenine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_4467]]
+
* Gene: [[Tiso_gene_6037]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_4468]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
+
* [[PWY-6700]], queuosine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6700 PWY-6700]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-3961]], phosphopantothenate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16373 16373]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03018 R03018]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A6I3 P0A6I3]
 
−
** [http://www.uniprot.org/uniprot/Q9CFM3 Q9CFM3]
 
−
** [http://www.uniprot.org/uniprot/P44793 P44793]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pantothenate_kinase_isoform_1}}
+
{{#set: common name=s-adenosylmethionine_trna_ribosyltransferase}}
−
{{#set: ec number=EC-2.7.1.33}}
+
{{#set: ec number=EC-2.4.99.17}}
−
{{#set: common name=type III pantothenate kinase}}
+
{{#set: gene associated=Tiso_gene_6037}}
−
{{#set: gene associated=Tiso_gene_4467|Tiso_gene_4468}}
+
{{#set: in pathway=PWY-6700}}
−
{{#set: in pathway=PANTO-PWY|PWY-3961|COA-PWY-1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:53, 21 March 2018

Reaction RXN0-1342

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • s-adenosylmethionine_trna_ribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6700, queuosine biosynthesis: PWY-6700
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-1342&oldid=44386"