Difference between revisions of "RXN-14803"

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(Created page with "Category:Gene == Gene Tiso_gene_15822 == * right end position: ** 2811 * transcription direction: ** NEGATIVE * left end position: ** 694 * centisome position: ** 14.52794...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14803 RXN-14803] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15822 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14803 RXN-14803] ==
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* right end position:
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* direction:
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** 2811
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** thiolase
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* left end position:
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** acetyl-_c-acetyltransferase
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** 694
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** 3-ketoacyl-_thiolase
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* centisome position:
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* ec number:
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** 14.527946   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[XYLULOKIN-RXN]]
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* With identifiers:
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-15691]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15692]][c]
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* With common name(s):
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** 1 coenzyme A[c] '''+''' 1 5-trans-3-oxo-dodecenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-trans-decenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_15327]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3856]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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** Source: [[annotation-experimental_annotation]]
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* [[DARABITOLUTIL-PWY]]
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*** Tool: [[pathwaytools]]
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* [[LARABITOLUTIL-PWY]]
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* [[XYLCAT-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=2811}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=thiolase}}
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{{#set: left end position=694}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: centisome position=14.527946    }}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: reaction associated=XYLULOKIN-RXN}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: pathway associated=DARABITOLUTIL-PWY|LARABITOLUTIL-PWY|XYLCAT-PWY}}
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{{#set: gene associated=Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_10116}}
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{{#set: in pathway=PWY-7340}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN-14803

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 5-trans-3-oxo-dodecenoyl-CoA[c] => 1 acetyl-CoA[c] + 1 3-trans-decenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14803&oldid=44457"