Difference between revisions of "SINAPOYL-COA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPDEPHOS-RXN PEPDEPHOS-RXN] == * direction: ** REVERSIBLE * common name: ** pyruvate_kinase * ec n...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SINAPOYL-COA SINAPOYL-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=C(...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPDEPHOS-RXN PEPDEPHOS-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SINAPOYL-COA SINAPOYL-COA] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=C(OC)C=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
 
* common name:
 
* common name:
−
** pyruvate_kinase
+
** sinapoyl-CoA
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/2.7.1.40 EC-2.7.1.40]
+
** InChIKey=RBFUWESMWRUGFY-GSNIOFLCSA-J
 +
* molecular weight:
 +
** 969.7  
 
* Synonym(s):
 
* Synonym(s):
 +
** sinapinoyl-CoA
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
* [[RXN-10919]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 pyruvate[c] '''+''' 1 ATP[c] '''<=>''' 1 phosphoenolpyruvate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
* [[RXN-1124]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_18206]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_14504]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_974]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Gene: [[Tiso_gene_14505]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
+
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
+
−
** '''8''' reactions found over '''12''' reactions in the full pathway
+
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
+
−
** '''11''' reactions found over '''15''' reactions in the full pathway
+
−
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
+
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
+
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
+
−
** '''9''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
+
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
+
−
** '''8''' reactions found over '''14''' reactions in the full pathway
+
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
+
−
** '''11''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18157 18157]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44229225 44229225]
−
* LIGAND-RXN:
+
* CHEBI:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00200 R00200]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57393 57393]
−
* UNIPROT:
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/Q7M034 Q7M034]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00411 C00411]
−
** [http://www.uniprot.org/uniprot/P11979 P11979]
+
{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=C(OC)C=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]}}
−
** [http://www.uniprot.org/uniprot/P11980 P11980]
+
{{#set: common name=sinapoyl-CoA}}
−
** [http://www.uniprot.org/uniprot/Q07637 Q07637]
+
{{#set: inchi key=InChIKey=RBFUWESMWRUGFY-GSNIOFLCSA-J}}
−
** [http://www.uniprot.org/uniprot/P34038 P34038]
+
{{#set: molecular weight=969.7    }}
−
** [http://www.uniprot.org/uniprot/P43924 P43924]
+
{{#set: common name=sinapinoyl-CoA}}
−
** [http://www.uniprot.org/uniprot/Q57572 Q57572]
+
{{#set: produced by=RXN-10919}}
−
** [http://www.uniprot.org/uniprot/P0AD61 P0AD61]
+
{{#set: reversible reaction associated=RXN-1124}}
−
** [http://www.uniprot.org/uniprot/P19680 P19680]
+
−
** [http://www.uniprot.org/uniprot/Q9PIB0 Q9PIB0]
+
−
** [http://www.uniprot.org/uniprot/P80885 P80885]
+
−
** [http://www.uniprot.org/uniprot/Q9UYU6 Q9UYU6]
+
−
** [http://www.uniprot.org/uniprot/Q9JWX8 Q9JWX8]
+
−
** [http://www.uniprot.org/uniprot/P47458 P47458]
+
−
** [http://www.uniprot.org/uniprot/Q46078 Q46078]
+
−
** [http://www.uniprot.org/uniprot/P30614 P30614]
+
−
** [http://www.uniprot.org/uniprot/P22200 P22200]
+
−
** [http://www.uniprot.org/uniprot/Q27788 Q27788]
+
−
** [http://www.uniprot.org/uniprot/P51182 P51182]
+
−
** [http://www.uniprot.org/uniprot/P51181 P51181]
+
−
** [http://www.uniprot.org/uniprot/P31865 P31865]
+
−
** [http://www.uniprot.org/uniprot/P00549 P00549]
+
−
** [http://www.uniprot.org/uniprot/P00548 P00548]
+
−
** [http://www.uniprot.org/uniprot/P30613 P30613]
+
−
** [http://www.uniprot.org/uniprot/O75758 O75758]
+
−
** [http://www.uniprot.org/uniprot/P12928 P12928]
+
−
** [http://www.uniprot.org/uniprot/O30853 O30853]
+
−
** [http://www.uniprot.org/uniprot/P30615 P30615]
+
−
** [http://www.uniprot.org/uniprot/P30616 P30616]
+
−
** [http://www.uniprot.org/uniprot/Q02499 Q02499]
+
−
** [http://www.uniprot.org/uniprot/P22360 P22360]
+
−
** [http://www.uniprot.org/uniprot/P21599 P21599]
+
−
** [http://www.uniprot.org/uniprot/P14618 P14618]
+
−
** [http://www.uniprot.org/uniprot/Q42954 Q42954]
+
−
** [http://www.uniprot.org/uniprot/Q40545 Q40545]
+
−
** [http://www.uniprot.org/uniprot/P52480 P52480]
+
−
** [http://www.uniprot.org/uniprot/P52489 P52489]
+
−
** [http://www.uniprot.org/uniprot/P78031 P78031]
+
−
** [http://www.uniprot.org/uniprot/Q55863 Q55863]
+
−
** [http://www.uniprot.org/uniprot/P73534 P73534]
+
−
** [http://www.uniprot.org/uniprot/O65595 O65595]
+
−
** [http://www.uniprot.org/uniprot/Q42806 Q42806]
+
−
** [http://www.uniprot.org/uniprot/Q43117 Q43117]
+
−
** [http://www.uniprot.org/uniprot/Q10208 Q10208]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=pyruvate_kinase}}
+
−
{{#set: ec number=EC-2.7.1.40}}
+
−
{{#set: gene associated=Tiso_gene_18206|Tiso_gene_14504|Tiso_gene_974|Tiso_gene_14505}}
+
−
{{#set: in pathway=PWY-1042|P341-PWY|PWY-2221|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|P124-PWY|NPGLUCAT-PWY|PWY-7383|PWY-6886|PWY-5723|FERMENTATION-PWY|PWY-7218|PWY-6142|P122-PWY|PWY-5484|PWY-7003}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:54, 21 March 2018

Metabolite SINAPOYL-COA

  • smiles:
    • CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=C(OC)C=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
  • common name:
    • sinapoyl-CoA
  • inchi key:
    • InChIKey=RBFUWESMWRUGFY-GSNIOFLCSA-J
  • molecular weight:
    • 969.7
  • Synonym(s):
    • sinapinoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=C(OC)C(O)=C(OC)C=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SINAPOYL-COA&oldid=44488"