Difference between revisions of "RXN-11570"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** amidase * ec number: ** [http...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11570 RXN-11570] == * direction: ** LEFT-TO-RIGHT * common name: ** n-acetylglucosamine-6-sulfa...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11570 RXN-11570] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** amidase
+
** n-acetylglucosamine-6-sulfatase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
+
** [http://enzyme.expasy.org/EC/3.1.6.14 EC-3.1.6.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-237]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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** 1 [[Keratan-sulfate-NAcGlcN6S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Keratan-sulfate-NAcGlc]][c] '''+''' 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 indole-3-acetamide[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
+
** 1 [keratan sulfate]-α-N-acetyl-D-glucosamine 6-O-sulfate[c] '''+''' 1 H2O[c] '''=>''' 1 [keratan sulfate]-α-N-acetyl-D-glucosamine[c] '''+''' 1 sulfate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[Tiso_gene_13682]]
+
* Gene: [[Tiso_gene_18170]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 
** '''3''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=amidase}}
+
{{#set: common name=n-acetylglucosamine-6-sulfatase}}
{{#set: ec number=EC-3.5.1.4}}
+
{{#set: ec number=EC-3.1.6.14}}
{{#set: gene associated=Tiso_gene_13682}}
+
{{#set: gene associated=Tiso_gene_18170}}
{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction RXN-11570

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • n-acetylglucosamine-6-sulfatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links