Difference between revisions of "RXN-10625"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-seryl-SEC-tRNAs L-seryl-SEC-tRNAs] == * common name: ** an L-seryl-[tRNAsec] * Synonym(s): =...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-seryl-SEC-tRNAs L-seryl-SEC-tRNAs] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** an L-seryl-[tRNAsec]
+
** geranylgeranyl_diphosphate_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN0-2161]]
+
** 3 [[PROTON]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[RXN-10038]]
+
** 3 H+[c] '''+''' 1 geranylgeranyl diphosphate[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 phytyl diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_2613]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=an L-seryl-[tRNAsec]}}
+
* RHEA:
−
{{#set: produced by=RXN0-2161}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26229 26229]
−
{{#set: reversible reaction associated=RXN-10038}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02063 R02063]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
 +
{{#set: ec number=EC-1.3.1.83}}
 +
{{#set: gene associated=Tiso_gene_2613}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:55, 21 March 2018

Reaction RXN-10625

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10625&oldid=44651"