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− | [[Category:Reaction]] | + | [[Category:Pathway]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295] == |
− | * direction: | + | * taxonomic range: |
− | ** LEFT-TO-RIGHT | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208] |
| + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157] |
| + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| * common name: | | * common name: |
− | ** pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial | + | ** pyrimidine ribonucleosides degradation |
− | ** dihydrolipoamide_acetyltransferase
| + | |
− | ** ORF
| + | |
− | * ec number:
| + | |
− | ** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
| + | |
| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reaction(s) found == |
− | * With identifiers:
| + | '''2''' reactions found over '''2''' reactions in the full pathway |
− | ** 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
| + | * [[CYTIDEAM2-RXN]] |
− | * With common name(s):
| + | ** 0 associated gene: |
− | ** 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 pyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c]
| + | ** 1 reconstruction source(s) associated: |
− | | + | *** [[annotation-in-silico_annotation]] |
− | == Genes associated with this reaction ==
| + | * [[URPHOS-RXN]] |
− | Genes have been associated with this reaction based on different elements listed below.
| + | ** 1 associated gene(s): |
− | * [[Tiso_gene_17539]]
| + | *** [[Tiso_gene_20384]] |
− | ** EXPERIMENTAL_ANNOTATION
| + | ** 1 reconstruction source(s) associated: |
− | ***EC-NUMBER
| + | *** [[annotation-in-silico_annotation]] |
− | ** [[pantograph]]-[[esiliculosus]]
| + | == Reaction(s) not found == |
− | * [[Tiso_gene_2693]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_7519]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_6983]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_2515]]
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | == Pathways ==
| + | |
− | * [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
| + | |
− | ** '''3''' reactions found over '''3''' reactions in the full pathway
| + | |
− | == Reconstruction information ==
| + | |
− | * [[orthology]]: | + | |
− | ** [[pantograph]]: | + | |
− | *** [[esiliculosus]] | + | |
− | * [[manual]]:
| + | |
− | ** [[primary_network]] | + | |
− | * [[annotation]]: | + | |
− | ** [[pathwaytools]]: | + | |
− | *** [[experimental_annotation]] | + | |
− | *** [[in-silico_annotation]] | + | |
| == External links == | | == External links == |
− | * LIGAND-RXN: | + | * ECOCYC: |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699] | + | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1295 PWY0-1295] |
− | * UNIPROT:
| + | {{#set: taxonomic range=TAX-33208}} |
− | ** [http://www.uniprot.org/uniprot/P06959 P06959]
| + | {{#set: taxonomic range=TAX-2157}} |
− | ** [http://www.uniprot.org/uniprot/P26267 P26267]
| + | {{#set: taxonomic range=TAX-2}} |
− | ** [http://www.uniprot.org/uniprot/P35485 P35485]
| + | {{#set: common name=pyrimidine ribonucleosides degradation}} |
− | ** [http://www.uniprot.org/uniprot/Q59097 Q59097]
| + | {{#set: reaction found=2}} |
− | ** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
| + | {{#set: total reaction=2}} |
− | ** [http://www.uniprot.org/uniprot/P45119 P45119]
| + | {{#set: completion rate=100.0}} |
− | ** [http://www.uniprot.org/uniprot/P11966 P11966]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35488 P35488]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47515 P47515]
| + | |
− | ** [http://www.uniprot.org/uniprot/P21882 P21882]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47516 P47516]
| + | |
− | ** [http://www.uniprot.org/uniprot/P21881 P21881]
| + | |
− | ** [http://www.uniprot.org/uniprot/P21873 P21873]
| + | |
− | ** [http://www.uniprot.org/uniprot/P16387 P16387]
| + | |
− | ** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
| + | |
− | ** [http://www.uniprot.org/uniprot/P08559 P08559]
| + | |
− | ** [http://www.uniprot.org/uniprot/P11177 P11177]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29803 P29803]
| + | |
− | ** [http://www.uniprot.org/uniprot/P29804 P29804]
| + | |
− | ** [http://www.uniprot.org/uniprot/P26284 P26284]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q09171 Q09171]
| + | |
− | ** [http://www.uniprot.org/uniprot/P52901 P52901]
| + | |
− | ** [http://www.uniprot.org/uniprot/P79931 P79931]
| + | |
− | ** [http://www.uniprot.org/uniprot/P79932 P79932]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
| + | |
− | ** [http://www.uniprot.org/uniprot/P10801 P10801]
| + | |
− | ** [http://www.uniprot.org/uniprot/P21874 P21874]
| + | |
− | ** [http://www.uniprot.org/uniprot/P49432 P49432]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q59820 Q59820]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35486 P35486]
| + | |
− | ** [http://www.uniprot.org/uniprot/P35487 P35487]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q06437 Q06437]
| + | |
− | ** [http://www.uniprot.org/uniprot/P32473 P32473]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q59107 Q59107]
| + | |
− | ** [http://www.uniprot.org/uniprot/P73405 P73405]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q49109 Q49109]
| + | |
− | ** [http://www.uniprot.org/uniprot/O48685 O48685]
| + | |
− | ** [http://www.uniprot.org/uniprot/P52902 P52902]
| + | |
− | ** [http://www.uniprot.org/uniprot/P52904 P52904]
| + | |
− | ** [http://www.uniprot.org/uniprot/P52903 P52903]
| + | |
− | ** [http://www.uniprot.org/uniprot/O66112 O66112]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
| + | |
− | ** [http://www.uniprot.org/uniprot/O69478 O69478]
| + | |
− | ** [http://www.uniprot.org/uniprot/P10802 P10802]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: common name=pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial}} | + | |
− | {{#set: common name=dihydrolipoamide_acetyltransferase}} | + | |
− | {{#set: common name=ORF}} | + | |
− | {{#set: ec number=EC-1.2.4.1}} | + | |
− | {{#set: gene associated=Tiso_gene_17539|Tiso_gene_2693|Tiso_gene_7519|Tiso_gene_6983|Tiso_gene_2515}} | + | |
− | {{#set: in pathway=PYRUVDEHYD-PWY}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |
− | {{#set: reconstruction source=esiliculosus}}
| + | |
− | {{#set: reconstruction category=manual}}
| + | |
− | {{#set: reconstruction source=primary_network}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |
− | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |