Difference between revisions of "RXN-5463"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLY GLY] == * smiles: ** C([N+])C([O-])=O * common name: ** glycine * inchi key: ** InChIKey=DH...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLY GLY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] ==
* smiles:
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* direction:
** C([N+])C([O-])=O
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** glycine
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** [http://enzyme.expasy.org/EC/2.4.1.257 EC-2.4.1.257]
* inchi key:
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** InChIKey=DHMQDGOQFOQNFH-UHFFFAOYSA-N
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* molecular weight:
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** 75.067   
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* Synonym(s):
 
* Synonym(s):
** G
 
** aminoacetic acid
 
** gly
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[RXN-13406]]
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* With identifiers:
* [[GLYRIBONUCSYN-RXN]]
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** 1 [[CPD-5161]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c]
* [[RME144]]
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* With common name(s):
* [[1.4.3.19-RXN]]
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** 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP[c] '''+''' 1 H+[c]
* [[GLYCINE--TRNA-LIGASE-RXN]]
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* [[RXN-10821]]
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== Genes associated with this reaction  ==
* [[GLUTATHIONE-SYN-RXN]]
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== Pathways  ==
== Reaction(s) known to produce the compound ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
* [[RXN-6622]]
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** '''19''' reactions found over '''19''' reactions in the full pathway
* [[2.3.2.15-RXN]]
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== Reconstruction information  ==
* [[RXN-13677]]
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* Category: [[annotation]]
* [[SARCOSINE-DEHYDROGENASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
* [[RXN-9896]]
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*** Tool: [[pathwaytools]]
* [[THREONINE-ALDOLASE-RXN]]
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* [[RXN66-577]]
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* [[RXN-6642]]
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* [[AKBLIG-RXN]]
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* [[RXN0-5234]]
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== Reaction(s) of unknown directionality ==
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* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
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* [[GLYCINE-AMINOTRANSFERASE-RXN]]
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* [[GCVP-RXN]]
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* [[GLYCINE-DEHYDROGENASE-RXN]]
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* [[GLYOHMETRANS-RXN]]
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* [[GLYNA1tm]]
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* [[GLYNA1th]]
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== External links  ==
 
== External links  ==
* CAS : 56-40-6
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* RHEA:
* BIGG : gly
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
* DRUGBANK : DB00145
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* LIGAND-RXN:
* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5257127 5257127]
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{{#set: direction=LEFT-TO-RIGHT}}
* KNAPSACK : C00001361
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{{#set: ec number=EC-2.4.1.257}}
* HMDB : HMDB00123
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
** [http://www.genome.jp/dbget-bin/www_bget?C00037 C00037]
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{{#set: reconstruction source=annotation-in-silico_annotation}}
* CHEMSPIDER:
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{{#set: reconstruction tool=pathwaytools}}
** [http://www.chemspider.com/Chemical-Structure.730.html 730]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15428 15428]
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* METABOLIGHTS : MTBLC15428
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{{#set: smiles=C([N+])C([O-])=O}}
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{{#set: common name=glycine}}
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{{#set: inchi key=InChIKey=DHMQDGOQFOQNFH-UHFFFAOYSA-N}}
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{{#set: molecular weight=75.067    }}
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{{#set: common name=G|aminoacetic acid|gly}}
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{{#set: consumed by=RXN-13406|GLYRIBONUCSYN-RXN|RME144|1.4.3.19-RXN|GLYCINE--TRNA-LIGASE-RXN|RXN-10821|GLUTATHIONE-SYN-RXN}}
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{{#set: produced by=RXN-6622|2.3.2.15-RXN|RXN-13677|SARCOSINE-DEHYDROGENASE-RXN|RXN-9896|THREONINE-ALDOLASE-RXN|RXN66-577|RXN-6642|AKBLIG-RXN|RXN0-5234}}
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{{#set: reversible reaction associated=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN|GLYCINE-AMINOTRANSFERASE-RXN|GCVP-RXN|GLYCINE-DEHYDROGENASE-RXN|GLYOHMETRANS-RXN|GLYNA1tm|GLYNA1th}}
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Latest revision as of 19:58, 21 March 2018

Reaction RXN-5463

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 GDP-α-D-mannose[c] => 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 GDP[c] + 1 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links