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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-pseudouridine-38-40 tRNA-pseudouridine-38-40] == |
| − | * direction: | + | * common name: |
| − | ** REVERSIBLE | + | ** a pseudouridine38-40 in tRNA |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** a tRNA pseudouridine38-40 |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[ACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
| + | * [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]] |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 acryloyl-CoA[c] '''+''' 1 H2O[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_5857]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | * Gene: [[Tiso_gene_16703]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | * Gene: [[Tiso_gene_14257]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
| + | |
| − | ** '''3''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-3941]], β-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
| + | |
| − | ** '''2''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
| + | |
| − | ** '''4''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] | + | |
| − | ** '''8''' reactions found over '''16''' reactions in the full pathway
| + | |
| − | * [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
| + | |
| − | ** '''2''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a pseudouridine38-40 in tRNA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
| + | {{#set: common name=a tRNA pseudouridine38-40}} |
| − | * LIGAND-RXN:
| + | {{#set: produced by=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: ec number=EC-4.2.1.116}} | + | |
| − | {{#set: gene associated=Tiso_gene_5857|Tiso_gene_16703|Tiso_gene_14257}} | + | |
| − | {{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
