Difference between revisions of "Tiso gene 4164"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_4164 == * right end position: ** 7436 * transcription direction: ** NEGATIVE * left end position: ** 6 * centisome position: ** 3.927215600...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] ==
+
== Gene Tiso_gene_4164 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 7436
−
* common name:
+
* transcription direction:
−
** 3-oxoacyl-synthase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** 6
 +
* centisome position:
 +
** 3.927215600e-2
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.1.3.16-RXN]]
−
** 1 [[Oleoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c]
+
−
* With common name(s):
+
−
** 1 an oleoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 an (11Z)-3-oxo-icos-11-enoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_5939]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: automated-name-match
−
** Source: [[annotation-experimental_annotation]]
+
* Reaction: [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7663]], gondoate biosynthesis (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
−
** Source: [[annotation-experimental_annotation]]
+
== Pathways associated ==
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=7436}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: left end position=6}}
−
{{#set: gene associated=Tiso_gene_5939}}
+
{{#set: centisome position=3.927215600e-2}}
−
{{#set: in pathway=PWY-7663}}
+
{{#set: reaction associated=3.1.3.16-RXN|PROTEIN-TYROSINE-PHOSPHATASE-RXN}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:02, 21 March 2018

Gene Tiso_gene_4164

  • right end position:
    • 7436
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 6
  • centisome position:
    • 3.927215600e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4164&oldid=45373"