Difference between revisions of "4.1.99.4-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** argininosucci...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** argininosuccinate_synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.5 EC-6.3.4.5]
+
** [http://enzyme.expasy.org/EC/3.5.99.7 EC-3.5.99.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-CITRULLINE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c]
+
** 1 [[CPD-68]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-citrulline[c] '''+''' 1 ATP[c] '''+''' 1 L-aspartate[c] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 L-arginino-succinate[c]
+
** 1 1-aminocyclopropane-1-carboxylate[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_12592]]
+
* Gene: [[Tiso_gene_11198]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-creinhardtii]]
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-esiliculosus]]
+
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16933 16933]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00997 R00997]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22768 P22768]
+
** [http://www.uniprot.org/uniprot/Q9V2L2 Q9V2L2]
−
** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
+
** [http://www.uniprot.org/uniprot/Q9WY68 Q9WY68]
−
** [http://www.uniprot.org/uniprot/P00966 P00966]
+
** [http://www.uniprot.org/uniprot/P30297 P30297]
−
** [http://www.uniprot.org/uniprot/P16460 P16460]
+
** [http://www.uniprot.org/uniprot/Q7M523 Q7M523]
−
** [http://www.uniprot.org/uniprot/P13256 P13256]
+
** [http://www.uniprot.org/uniprot/Q9URX3 Q9URX3]
−
** [http://www.uniprot.org/uniprot/P13257 P13257]
+
−
** [http://www.uniprot.org/uniprot/P09034 P09034]
+
−
** [http://www.uniprot.org/uniprot/P24532 P24532]
+
−
** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
+
−
** [http://www.uniprot.org/uniprot/P57799 P57799]
+
−
** [http://www.uniprot.org/uniprot/Q60174 Q60174]
+
−
** [http://www.uniprot.org/uniprot/P44315 P44315]
+
−
** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
+
−
** [http://www.uniprot.org/uniprot/P50986 P50986]
+
−
** [http://www.uniprot.org/uniprot/Q06734 Q06734]
+
−
** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
+
−
** [http://www.uniprot.org/uniprot/Q59491 Q59491]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=argininosuccinate_synthase}}
+
{{#set: ec number=EC-3.5.99.7}}
−
{{#set: ec number=EC-6.3.4.5}}
+
{{#set: gene associated=Tiso_gene_11198}}
−
{{#set: gene associated=Tiso_gene_12592}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-4984|ARGSYN-PWY|PWY-5154|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:02, 21 March 2018

Reaction 4.1.99.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 1-aminocyclopropane-1-carboxylate[c] + 1 H2O[c] => 1 ammonium[c] + 1 2-oxobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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