Difference between revisions of "RXN-13697"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.53-RXN 3.4.21.53-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Lon protease homolo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] == * direction: ** REVERSIBLE * common name: ** aspartate_aminotransferase **...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.53-RXN 3.4.21.53-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Lon protease homolog, mitochondrial
+
** aspartate_aminotransferase
−
** Lon Protease
+
** aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.21.53 EC-3.4.21.53]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''=>''' 1 [[Peptides-holder]][c]
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a protein[c] '''=>''' 1 a peptide[c]
+
** 1 L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 oxaloacetate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_4277]]
+
* Gene: [[Tiso_gene_13538]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12889]]
 +
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_7032]]
+
* Gene: [[Tiso_gene_6815]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17718]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17809]]
 +
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_15680]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P36774 P36774]
+
{{#set: common name=aspartate_aminotransferase}}
−
** [http://www.uniprot.org/uniprot/P36773 P36773]
+
{{#set: common name=aminotransferase}}
−
** [http://www.uniprot.org/uniprot/P43864 P43864]
+
{{#set: ec number=EC-2.6.1.1}}
−
** [http://www.uniprot.org/uniprot/O66605 O66605]
+
{{#set: gene associated=Tiso_gene_13538|Tiso_gene_12889|Tiso_gene_6815|Tiso_gene_17718|Tiso_gene_17809|Tiso_gene_15680}}
−
** [http://www.uniprot.org/uniprot/Q9ZD92 Q9ZD92]
+
{{#set: in pathway=PWY-7117|PWY-7115}}
−
** [http://www.uniprot.org/uniprot/Q9ZJL3 Q9ZJL3]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/Q9X1W8 Q9X1W8]
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/O83536 O83536]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9Z9F4 Q9Z9F4]
+
−
** [http://www.uniprot.org/uniprot/P55995 P55995]
+
−
** [http://www.uniprot.org/uniprot/O84348 O84348]
+
−
** [http://www.uniprot.org/uniprot/P47481 P47481]
+
−
** [http://www.uniprot.org/uniprot/O51558 O51558]
+
−
** [http://www.uniprot.org/uniprot/O69300 O69300]
+
−
** [http://www.uniprot.org/uniprot/Q59185 Q59185]
+
−
** [http://www.uniprot.org/uniprot/Q9JUC0 Q9JUC0]
+
−
** [http://www.uniprot.org/uniprot/P37945 P37945]
+
−
** [http://www.uniprot.org/uniprot/P77810 P77810]
+
−
** [http://www.uniprot.org/uniprot/P46067 P46067]
+
−
** [http://www.uniprot.org/uniprot/P78025 P78025]
+
−
** [http://www.uniprot.org/uniprot/Q59511 Q59511]
+
−
** [http://www.uniprot.org/uniprot/P0A9M0 P0A9M0]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Lon protease homolog, mitochondrial}}
+
−
{{#set: common name=Lon Protease}}
+
−
{{#set: ec number=EC-3.4.21.53}}
+
−
{{#set: gene associated=Tiso_gene_4277|Tiso_gene_7032}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:02, 21 March 2018

Reaction RXN-13697

  • direction:
    • REVERSIBLE
  • common name:
    • aspartate_aminotransferase
    • aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13697&oldid=45462"