Difference between revisions of "TETRAACYLDISACC4KIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CIT HOMO-CIT] == * smiles: ** C(C([O-])=O)CC(O)(C([O-])=O)CC([O-])=O * common name: ** (2R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TETRAACYLDISACC4KIN-RXN TETRAACYLDISACC4KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CIT HOMO-CIT] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TETRAACYLDISACC4KIN-RXN TETRAACYLDISACC4KIN-RXN] ==
−
* smiles:
+
* direction:
−
** C(C([O-])=O)CC(O)(C([O-])=O)CC([O-])=O
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** (2R)-homocitrate
+
** ORF
−
* inchi key:
+
* ec number:
−
** InChIKey=XKJVEVRQMLKSMO-SSDOTTSWSA-K
+
** [http://enzyme.expasy.org/EC/2.7.1.130 EC-2.7.1.130]
−
* molecular weight:
+
−
** 203.128   
+
 
* Synonym(s):
 
* Synonym(s):
−
** 2-hydroxybutane-1,2,4-tricarboxylate
 
−
** homocitric acid
 
−
** 3-hydroxy-3-carboxyadipic acid
 
−
** (2R)-2-hydroxybutane-1,2,4-tricarboxylate
 
−
** (R)-2-hydroxybutane-1,2,4-tricarboxylate
 
−
** homocitrate
 
−
** (R)-homocitrate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[BISOHMYR-GLC]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[LIPID-IV-A]][c]
−
* [[RXN-13722]]
+
* With common name(s):
 +
** 1 lipid A disaccharide[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 lipid IVA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_8779]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8780]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 3562-74-1
+
* RHEA:
−
* PUBCHEM:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20700 20700]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849228 20849228]
+
* LIGAND-RXN:
−
* HMDB : HMDB03518
+
** [http://www.genome.jp/dbget-bin/www_bget?R04657 R04657]
−
* LIGAND-CPD:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?C01251 C01251]
+
** [http://www.uniprot.org/uniprot/P27300 P27300]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/O67572 O67572]
−
** [http://www.chemspider.com/Chemical-Structure.20171681.html 20171681]
+
** [http://www.uniprot.org/uniprot/Q9PPA9 Q9PPA9]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/Q9JVE4 Q9JVE4]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58884 58884]
+
** [http://www.uniprot.org/uniprot/Q9KQX0 Q9KQX0]
−
{{#set: smiles=C(C([O-])=O)CC(O)(C([O-])=O)CC([O-])=O}}
+
** [http://www.uniprot.org/uniprot/Q9HZM3 Q9HZM3]
−
{{#set: common name=(2R)-homocitrate}}
+
** [http://www.uniprot.org/uniprot/Q9ZCL0 Q9ZCL0]
−
{{#set: inchi key=InChIKey=XKJVEVRQMLKSMO-SSDOTTSWSA-K}}
+
** [http://www.uniprot.org/uniprot/Q9K0D7 Q9K0D7]
−
{{#set: molecular weight=203.128    }}
+
** [http://www.uniprot.org/uniprot/P44491 P44491]
−
{{#set: common name=2-hydroxybutane-1,2,4-tricarboxylate|homocitric acid|3-hydroxy-3-carboxyadipic acid|(2R)-2-hydroxybutane-1,2,4-tricarboxylate|(R)-2-hydroxybutane-1,2,4-tricarboxylate|homocitrate|(R)-homocitrate}}
+
** [http://www.uniprot.org/uniprot/Q9PEE6 Q9PEE6]
−
{{#set: reversible reaction associated=RXN-13722}}
+
** [http://www.uniprot.org/uniprot/O25095 O25095]
 +
** [http://www.uniprot.org/uniprot/Q9ZMB1 Q9ZMB1]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-2.7.1.130}}
 +
{{#set: gene associated=Tiso_gene_8779|Tiso_gene_8780}}
 +
{{#set: in pathway=NAGLIPASYN-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction TETRAACYLDISACC4KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 lipid A disaccharide[c] + 1 ATP[c] => 1 H+[c] + 1 ADP[c] + 1 lipid IVA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TETRAACYLDISACC4KIN-RXN&oldid=45556"