Difference between revisions of "Tiso gene 14646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TETRAACYLDISACC4KIN-RXN TETRAACYLDISACC4KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Gene == Gene Tiso_gene_14646 == * right end position: ** 2190 * transcription direction: ** NEGATIVE * left end position: ** 1109 * centisome position: ** 20.1015...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TETRAACYLDISACC4KIN-RXN TETRAACYLDISACC4KIN-RXN] ==
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== Gene Tiso_gene_14646 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2190
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.130 EC-2.7.1.130]
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** 1109
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* centisome position:
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** 20.101503   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[BISOHMYR-GLC]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[LIPID-IV-A]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 lipid A disaccharide[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 lipid IVA[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* Gene: [[Tiso_gene_8779]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_8780]]
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* Reaction: [[RXN-12196]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN0-5462]]
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* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2190}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20700 20700]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1109}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04657 R04657]
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{{#set: centisome position=20.101503    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P27300 P27300]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/O67572 O67572]
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** [http://www.uniprot.org/uniprot/Q9PPA9 Q9PPA9]
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** [http://www.uniprot.org/uniprot/Q9JVE4 Q9JVE4]
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** [http://www.uniprot.org/uniprot/Q9KQX0 Q9KQX0]
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** [http://www.uniprot.org/uniprot/Q9HZM3 Q9HZM3]
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** [http://www.uniprot.org/uniprot/Q9ZCL0 Q9ZCL0]
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** [http://www.uniprot.org/uniprot/Q9K0D7 Q9K0D7]
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** [http://www.uniprot.org/uniprot/P44491 P44491]
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** [http://www.uniprot.org/uniprot/Q9PEE6 Q9PEE6]
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** [http://www.uniprot.org/uniprot/O25095 O25095]
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** [http://www.uniprot.org/uniprot/Q9ZMB1 Q9ZMB1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.7.1.130}}
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{{#set: gene associated=Tiso_gene_8779|Tiso_gene_8780}}
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{{#set: in pathway=NAGLIPASYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:03, 21 March 2018

Gene Tiso_gene_14646

  • right end position:
    • 2190
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1109
  • centisome position:
    • 20.101503
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14646&oldid=45578"