Difference between revisions of "RXN-14196"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DIOXYGENASE-RXN CYSTEINE-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14196 RXN-14196] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_pyr1-3 ** carbamoyl...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DIOXYGENASE-RXN CYSTEINE-DIOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14196 RXN-14196] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cysteine_dioxygenase
+
** protein_pyr1-3
 +
** carbamoyl_phosphate_synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.13.11.20 EC-1.13.11.20]
+
** [http://enzyme.expasy.org/EC/2.7.2 EC-2.7.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-SULFINOALANINE]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CARBAMATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 L-cysteine[c] '''=>''' 1 H+[c] '''+''' 1 3-sulfinoalanine[c]
+
** 1 ATP[c] '''+''' 1 carbamate[c] '''=>''' 1 ADP[c] '''+''' 1 carbamoyl phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1457]]
+
* Gene: [[Tiso_gene_4975]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4976]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4685]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5331]], taurine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5331 PWY-5331]
+
* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''12''' reactions in the full pathway
−
* [[CYSTEINE-DEG-PWY]], L-cysteine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DEG-PWY CYSTEINE-DEG-PWY]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20441 20441]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30758 30758]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00893 R00893]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01395 R01395]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P21816 P21816]
+
−
** [http://www.uniprot.org/uniprot/Q16878 Q16878]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cysteine_dioxygenase}}
+
{{#set: common name=protein_pyr1-3}}
−
{{#set: ec number=EC-1.13.11.20}}
+
{{#set: common name=carbamoyl_phosphate_synthetase}}
−
{{#set: gene associated=Tiso_gene_1457}}
+
{{#set: ec number=EC-2.7.2}}
−
{{#set: in pathway=PWY-5331|CYSTEINE-DEG-PWY}}
+
{{#set: gene associated=Tiso_gene_4975|Tiso_gene_4976|Tiso_gene_4685}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7693}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:38, 21 March 2018

Reaction RXN-14196

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • protein_pyr1-3
    • carbamoyl_phosphate_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 carbamate[c] => 1 ADP[c] + 1 carbamoyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7693, guadinomine B biosynthesis: PWY-7693
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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