Difference between revisions of "PWY-4261"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Naringenin chalcone iso...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=APIGNAR-RXN APIGNAR-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** Naringenin chalcone isomerase
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** glycerol degradation I
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** atp-dependent_rna_helicase_dhx30-like
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* ec number:
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** [http://enzyme.expasy.org/EC/5.5.1.6 EC-5.5.1.6]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''2''' reactions in the full pathway
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** 1 [[APIGENIN]][c] '''=>''' 1 [[NARINGENIN-CMPD]][c]
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* [[GLYCEROL-KIN-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 2',4,4',6'-tetrahydroxychalcone[c] '''=>''' 1 (2S)-naringenin[c]
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*** [[Tiso_gene_12434]]
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*** [[Tiso_gene_16670]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_13414]]
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*** [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_9838]]
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* [[RXN-15745]]
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** [[pantograph]]-[[esiliculosus]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_15777]]
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* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
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** 3 reconstruction source(s) associated:
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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*** [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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== Reaction(s) not found ==
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** '''5''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R02446 R02446]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-4261 PWY-4261]
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* UNIPROT:
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* ARACYC:
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** [http://www.uniprot.org/uniprot/P11650 P11650]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4261 PWY-4261]
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** [http://www.uniprot.org/uniprot/P11651 P11651]
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/P41088 P41088]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P14298 P14298]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/Q42925 Q42925]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/Q42926 Q42926]
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{{#set: common name=glycerol degradation I}}
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** [http://www.uniprot.org/uniprot/Q08704 Q08704]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P28012 P28012]
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/P41089 P41089]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/O81980 O81980]
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** [http://www.uniprot.org/uniprot/O22604 O22604]
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** [http://www.uniprot.org/uniprot/O22651 O22651]
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** [http://www.uniprot.org/uniprot/Q43754 Q43754]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Naringenin chalcone isomerase}}
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{{#set: common name=atp-dependent_rna_helicase_dhx30-like}}
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{{#set: ec number=EC-5.5.1.6}}
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{{#set: gene associated=Tiso_gene_13414|Tiso_gene_9838}}
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{{#set: in pathway=PWY-7397|PWY1F-FLAVSYN|PWY-6787}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:07, 21 March 2018

Pathway PWY-4261

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links





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