Difference between revisions of "RXN0-308"

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(Created page with "Category:Gene == Gene Tiso_gene_6680 == * right end position: ** 3307 * transcription direction: ** POSITIVE * left end position: ** 1527 * centisome position: ** 6.608959...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** cys...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6680 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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* right end position:
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* direction:
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** 3307
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** cysteine_mitochondrial
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* left end position:
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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** 1527
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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** 6.608959   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[GLUTATHIONE-PEROXIDASE-RXN]]
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* With identifiers:
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** 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
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* With common name(s):
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** 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''+''' 1 L-alanine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4284]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Reaction: [[GTHP]]
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* Gene: [[Tiso_gene_11478]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[DETOX1-PWY-1]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-4081]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14710]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=3307}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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{{#set: left end position=1527}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=6.608959    }}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: reaction associated=GLUTATHIONE-PEROXIDASE-RXN|GTHP}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: pathway associated=DETOX1-PWY-1|PWY-4081}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: gene associated=Tiso_gene_4284|Tiso_gene_11478|Tiso_gene_14710}}
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{{#set: in pathway=PWY0-1021|PWY-6823|PWY-6891|PWY-6892}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:08, 21 March 2018

Reaction RXN0-308

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1021, L-alanine biosynthesis III: PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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