Difference between revisions of "Tiso gene 18824"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.91-RXN 2.3.1.91-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_18824 == * right end position: ** 2680 * transcription direction: ** POSITIVE * left end position: ** 344 * centisome position: ** 12.40981...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.91-RXN 2.3.1.91-RXN] ==
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== Gene Tiso_gene_18824 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2680
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.91 EC-2.3.1.91]
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** POSITIVE
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* left end position:
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** 344
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* centisome position:
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** 12.409812   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[CHOLINE]][c] '''+''' 1 [[1-O-SINAPOYL-BETA-D-GLUCOSE]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[O-SINAPOYLCHOLINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 choline[c] '''+''' 1 1-O-sinapoyl-β-D-glucose[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 O-sinapoylcholine[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_14881]]
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* [[PWY-7511]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_11785]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_514]]
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** Source: [[orthology-athaliana]]
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== Pathways ==
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* [[PWY-3301]], sinapate ester biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3301 PWY-3301]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2680}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12024 12024]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=344}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03075 R03075]
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{{#set: centisome position=12.409812    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: ec number=EC-2.3.1.91}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: gene associated=Tiso_gene_14881|Tiso_gene_11785|Tiso_gene_514}}
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{{#set: in pathway=PWY-3301}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:09, 21 March 2018

Gene Tiso_gene_18824

  • right end position:
    • 2680
  • transcription direction:
    • POSITIVE
  • left end position:
    • 344
  • centisome position:
    • 12.409812
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18824&oldid=46330"