Difference between revisions of "SEDOHEPTULOSE-BISPHOSPHATASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] == * direction: ** LEFT-TO...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOHEPTULOSE-BISPHOSPHATASE-RXN SEDOHEPTULOSE-BISPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOHEPTULOSE-BISPHOSPHATASE-RXN SEDOHEPTULOSE-BISPHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** sedoheptulose-_-bisphosphatase
 +
** sbpase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.3.4 EC-4.1.3.4]
+
** [http://enzyme.expasy.org/EC/3.1.3.37 EC-3.1.3.37]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[D-SEDOHEPTULOSE-7-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''=>''' 1 acetoacetate[c] '''+''' 1 acetyl-CoA[c]
+
** 1 D-sedoheptulose-1,7-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 D-sedoheptulose 7-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_3769]]
+
* Gene: [[Tiso_gene_8226]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_4905]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16502]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_9435]]
 +
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
+
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''13''' reactions found over '''13''' reactions in the full pathway
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5074]], mevalonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5074 PWY-5074]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
Line 38: Line 55:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24404 24404]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17461 17461]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P35914 P35914]
+
** [http://www.uniprot.org/uniprot/P23014 P23014]
−
** [http://www.uniprot.org/uniprot/P35915 P35915]
+
** [http://www.uniprot.org/uniprot/P46285 P46285]
−
** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2]
+
** [http://www.uniprot.org/uniprot/P46283 P46283]
 +
** [http://www.uniprot.org/uniprot/P46284 P46284]
 +
** [http://www.uniprot.org/uniprot/O23780 O23780]
 +
** [http://www.uniprot.org/uniprot/O20252 O20252]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.3.4}}
+
{{#set: common name=sedoheptulose-_-bisphosphatase}}
−
{{#set: gene associated=Tiso_gene_3769}}
+
{{#set: common name=sbpase}}
−
{{#set: in pathway=PWY66-367|LEU-DEG2-PWY|PWY-5074}}
+
{{#set: ec number=EC-3.1.3.37}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: gene associated=Tiso_gene_8226|Tiso_gene_4905|Tiso_gene_16502|Tiso_gene_9435}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: in pathway=CALVIN-PWY}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|manual-primary_network|orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:09, 21 March 2018

Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sedoheptulose-_-bisphosphatase
    • sbpase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SEDOHEPTULOSE-BISPHOSPHATASE-RXN&oldid=46437"