Difference between revisions of "RXN-12611"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16615 RXN-16615] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] == * direction: ** LEFT-TO-RIGHT * common name: ** thiamin phosphate synthase...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** thiamin phosphate synthase |
| + | ** ORF | ||
| + | ** thiamine_monophosphate_synthase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13575]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[THIAMINE-P]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate[c] '''+''' 2 H+[c] '''=>''' 1 CO2[c] '''+''' 1 thiamine phosphate[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_2159]] |
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | ** Source: [[annotation- | + | * Gene: [[Tiso_gene_2160]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_10320]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-6894]], thiamine diphosphate biosynthesis I (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894] |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | |||
| − | |||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=thiamin phosphate synthase}} |
| − | {{#set: ec number=EC-2. | + | {{#set: common name=ORF}} |
| − | {{#set: gene associated= | + | {{#set: common name=thiamine_monophosphate_synthase}} |
| − | {{#set: in pathway=PWY- | + | {{#set: ec number=EC-2.5.1.3}} |
| + | {{#set: gene associated=Tiso_gene_2159|Tiso_gene_2160|Tiso_gene_10320}} | ||
| + | {{#set: in pathway=PWY-6894}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| − | {{#set: reconstruction source=annotation-in-silico_annotation | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:10, 21 March 2018
Contents
Reaction RXN-12611
- direction:
- LEFT-TO-RIGHT
- common name:
- thiamin phosphate synthase
- ORF
- thiamine_monophosphate_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP[c] + 1 CPD-13575[c] + 2 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 THIAMINE-P[c] + 1 PPI[c]
- With common name(s):
- 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] + 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate[c] + 2 H+[c] => 1 CO2[c] + 1 thiamine phosphate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2159
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_2160
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_10320
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6894, thiamine diphosphate biosynthesis I (E. coli): PWY-6894
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
