Difference between revisions of "DETHIOBIOTIN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] == * direction: ** REVERSIBLE *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN DETHIOBIOTIN] == * smiles: ** CC1(NC(=O)NC1CCCCCC(=O)[O-]) * common name: ** dethi...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN DETHIOBIOTIN] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** CC1(NC(=O)NC1CCCCCC(=O)[O-])
 
* common name:
 
* common name:
−
** pentafunctional_protein
+
** dethiobiotin
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/4.2.1.10 EC-4.2.1.10]
+
** InChIKey=AUTOLBMXDDTRRT-UHFFFAOYSA-M
 +
* molecular weight:
 +
** 213.256   
 
* Synonym(s):
 
* Synonym(s):
 +
** desthiobiotin
 +
** DTB
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[2.8.1.6-RXN]]
−
** 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
+
* [[RXN-17472]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 3-dehydroquinate[c] '''<=>''' 1 3-dehydroshikimate[c] '''+''' 1 H2O[c]
+
* [[DETHIOBIOTIN-SYN-RXN]]
−
 
+
== Reaction(s) of unknown directionality ==
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_14718]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_5752]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_5753]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_5619]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_8720]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-6707]], gallate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6416]], quinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6416 PWY-6416]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[QUINATEDEG-PWY]], quinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 533-48-2
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
+
* PUBCHEM:
−
* LIGAND-RXN:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244917 25244917]
−
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
+
* HMDB : HMDB03581
−
* UNIPROT:
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P05195 P05195]
+
** [http://www.genome.jp/dbget-bin/www_bget?C01909 C01909]
−
** [http://www.uniprot.org/uniprot/P46380 P46380]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57861 57861]
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
* BIGG : dtbt
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
{{#set: smiles=CC1(NC(=O)NC1CCCCCC(=O)[O-])}}
−
** [http://www.uniprot.org/uniprot/P43878 P43878]
+
{{#set: common name=dethiobiotin}}
−
** [http://www.uniprot.org/uniprot/P05194 P05194]
+
{{#set: inchi key=InChIKey=AUTOLBMXDDTRRT-UHFFFAOYSA-M}}
−
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
+
{{#set: molecular weight=213.256    }}
−
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
+
{{#set: common name=desthiobiotin|DTB}}
−
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
+
{{#set: consumed by=2.8.1.6-RXN|RXN-17472}}
−
** [http://www.uniprot.org/uniprot/P05147 P05147]
+
{{#set: produced by=DETHIOBIOTIN-SYN-RXN}}
−
** [http://www.uniprot.org/uniprot/P24670 P24670]
+
−
** [http://www.uniprot.org/uniprot/P35146 P35146]
+
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
+
−
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
+
−
** [http://www.uniprot.org/uniprot/P73367 P73367]
+
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=pentafunctional_protein}}
+
−
{{#set: ec number=EC-4.2.1.10}}
+
−
{{#set: gene associated=Tiso_gene_14718|Tiso_gene_5752|Tiso_gene_5753|Tiso_gene_5619|Tiso_gene_8720}}
+
−
{{#set: in pathway=PWY-6707|PWY-6416|QUINATEDEG-PWY|PWY-6163}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:10, 21 March 2018

Metabolite DETHIOBIOTIN

  • smiles:
    • CC1(NC(=O)NC1CCCCCC(=O)[O-])
  • common name:
    • dethiobiotin
  • inchi key:
    • InChIKey=AUTOLBMXDDTRRT-UHFFFAOYSA-M
  • molecular weight:
    • 213.256
  • Synonym(s):
    • desthiobiotin
    • DTB

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 533-48-2
  • PUBCHEM:
  • HMDB : HMDB03581
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : dtbt
"CC1(NC(=O)NC1CCCCCC(=O)[O-])" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DETHIOBIOTIN&oldid=46572"