Difference between revisions of "RXN-17113"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1133 RXN0-1133] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrolipoamide_acetyltran...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1133 RXN0-1133] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dihydrolipoamide_acetyltransferase
+
** acyl-coenzyme_a_oxidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.12 EC-2.3.1.12]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETYL-COA]][c] '''+''' 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-18491]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-18492]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 acetyl-CoA[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''=>''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] '''+''' 1 coenzyme A[c]
+
** 1 oxygen[c] '''+''' 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_19780]]
+
* Gene: [[Tiso_gene_18566]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_2693]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
+
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02569 R02569]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q01991 Q01991]
 
−
** [http://www.uniprot.org/uniprot/P12695 P12695]
 
−
** [http://www.uniprot.org/uniprot/Q7M2M8 Q7M2M8]
 
−
** [http://www.uniprot.org/uniprot/P10515 P10515]
 
−
** [http://www.uniprot.org/uniprot/Q39082 Q39082]
 
−
** [http://www.uniprot.org/uniprot/Q9TRP7 Q9TRP7]
 
−
** [http://www.uniprot.org/uniprot/Q7M0X6 Q7M0X6]
 
−
** [http://www.uniprot.org/uniprot/Q59098 Q59098]
 
−
** [http://www.uniprot.org/uniprot/Q9PF09 Q9PF09]
 
−
** [http://www.uniprot.org/uniprot/P35489 P35489]
 
−
** [http://www.uniprot.org/uniprot/P21883 P21883]
 
−
** [http://www.uniprot.org/uniprot/Q59658 Q59658]
 
−
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 
−
** [http://www.uniprot.org/uniprot/Q59298 Q59298]
 
−
** [http://www.uniprot.org/uniprot/P45118 P45118]
 
−
** [http://www.uniprot.org/uniprot/Q54102 Q54102]
 
−
** [http://www.uniprot.org/uniprot/P11961 P11961]
 
−
** [http://www.uniprot.org/uniprot/Q59821 Q59821]
 
−
** [http://www.uniprot.org/uniprot/P08461 P08461]
 
−
** [http://www.uniprot.org/uniprot/Q16791 Q16791]
 
−
** [http://www.uniprot.org/uniprot/Q41737 Q41737]
 
−
** [http://www.uniprot.org/uniprot/O64968 O64968]
 
−
** [http://www.uniprot.org/uniprot/P10802 P10802]
 
−
** [http://www.uniprot.org/uniprot/P06959 P06959]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dihydrolipoamide_acetyltransferase}}
+
{{#set: common name=acyl-coenzyme_a_oxidase}}
−
{{#set: ec number=EC-2.3.1.12}}
+
{{#set: ec number=EC-1.3.3.6}}
−
{{#set: gene associated=Tiso_gene_19780|Tiso_gene_2693}}
+
{{#set: gene associated=Tiso_gene_18566}}
−
{{#set: in pathway=PYRUVDEHYD-PWY}}
+
{{#set: in pathway=PWY-7726}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction RXN-17113

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] => 1 hydrogen peroxide[c] + 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17113&oldid=46660"