Difference between revisions of "HACD5m"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.8-RXN 1.5.1.8-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HACD5m HACD5m] == * direction: ** REVERSIBLE * common name: ** 3-hydroxyacyl-CoA dehydrogenase (C12...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.8-RXN 1.5.1.8-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HACD5m HACD5m] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.5.1.8 EC-1.5.1.8]
+
** 3-hydroxyacyl-CoA dehydrogenase (C12:0)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
** 1.0 [[NADH]][m] '''+''' 1.0 [[PROTON]][m] '''+''' 1.0 [[CPD0-2105]][m] '''<=>''' 1.0 [[CPD0-2107]][m] '''+''' 1.0 [[NAD]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 L-lysine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 NADPH[c] '''=>''' 1 L-saccharopine[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
+
** 1.0 NADH[m] '''+''' 1.0 H+[m] '''+''' 1.0 3-oxododecanoyl-CoA[m] '''<=>''' 1.0 (S)-3-hydroxydodecanoyl-CoA[m] '''+''' 1.0 NAD+[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_1156]]
+
* Gene: [[Tiso_gene_5857]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19375 19375]
+
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase (C12:0)}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_5857}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00716 R00716]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q9SMZ4 Q9SMZ4]
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec number=EC-1.5.1.8}}
+
−
{{#set: gene associated=Tiso_gene_1156}}
+
−
{{#set: in pathway=LYSINE-DEG1-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:13, 21 March 2018

Reaction HACD5m

  • direction:
    • REVERSIBLE
  • common name:
    • 3-hydroxyacyl-CoA dehydrogenase (C12:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 NADH[m] + 1.0 H+[m] + 1.0 3-oxododecanoyl-CoA[m] <=> 1.0 (S)-3-hydroxydodecanoyl-CoA[m] + 1.0 NAD+[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HACD5m&oldid=46870"